| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1633 |
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| Symbol | |
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| ID | 6463206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1720231 |
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| End bp | 1721643 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727849 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002018487 |
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| Protein GI | 194336693 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.788464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTATGA ATCGACACGT AGTATCAGGA ATTTTCTCAT TTTTCTGCAG TGCTGCACTG
TTTCTTGCTT CCTCATCAAC CGTCATCGGC AGTGAAAGAG TAGAGAAAAC ACTCTCGCTT
GCCAACTGTA TAGAAATTGC ACTGAGCAAT GCCACTTCAG CCAAAAAGGC AGACGCAAAC
CTGAAACTGC GGGGTTCAGA CGTTTTAAGA CGTTACGGCA GTTTTCTTCC CCGACTTTCG
GTATCGGCTG GCTATGCACC TTATACACTC AGCCGAACCT ATACCACAGG CTACCCTGTA
GCTGAAGTAC AGAAAACCAC CATGAAATCG GCGGATTTGA CTCTTTCCAC CTCACTGAAT
CTGTTTAACG GATTCAGTGA CTACGCATCC CTGCAAGCAT CGCTCAAACA GGAGCGCGCC
GCAGAATATA CCCTTCAGCG AGTACTCGAA AGTGTTGTGT ACGATGTTAC CCAAACCTAT
TTCCAGGTAC GACTGAACCA GGAACTTCTT GCTATTGCAC GCGAAAACCT TCTGCTCGCC
CAGGATCAAC TGACCCTGAC TGACCGGCAA TTTCAAATCG GCCTTAAATC AATGACCGAT
CGTTACCAGC AACAGGCCGA TGCTTCTGAA AGCGCTCTCC AGGTCATAAA AGCAGAGACC
CGTATGCAAC GCAGTATGTC TGAACTGCTT CGACGCCTTC AGATAGAGCC ACAAACAAGG
ATACTCCTGA TAGCCTCTCC GGAAGAGTTG AAAGTCACTC TTTCGTCAAA ACTTGATATT
GACAGCCTTG CCGCCACAGC TCTTGAAAGA AGAACTGATC TTAAAAGCAA ACTCCTTGAA
ACCGATGCAG CCAAATGGCA GACAAGGGTA TCACGAGCGC CATGGTATCC AAGAGTTGAC
CTTGGTTTCA ACGTCAGTAC AGCGGGAAGC GAGTACCTGC ATAACGAATA CGCCTATCCC
CCGCTTTCTG AACAGTTGCG CCATACGGTC GGATACTCGG TATCCCTGAA CCTCAATTGG
GCGATCTTTG ACGGATTTCA GACCCGCTAC AATGTTGAAT CAGCCAAAAT CAACCAGTTG
AACCAGCGAC TTGATTATGA TGATTTGAAA AGAGACATCG TTATCGACCT TCAGCAGAGC
GCAGGCGAGT ATACCTCCGC ATTCATGCAG ATTGAAACGG CCAACCTCAG TTTTACGGCA
GCACAGTCGG CATATGAAGG TATAAAAAGA AAATATGAAC TTGGCGCTGC GGGATTTGTA
GAGCTCAGCT CGGCACGAGC TACCCTTTTC AATGCCCGAT CCAATCTTTC CCAGGCCACC
TTCAATCTCG CTTTACAAAA AAGCATTCTT GATTTCACAA CAGGCAACAT AACCATACCA
CAGCTAACCG AATCCAGTAT ACCACTCAGA TGA
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| Protein sequence | MVMNRHVVSG IFSFFCSAAL FLASSSTVIG SERVEKTLSL ANCIEIALSN ATSAKKADAN
LKLRGSDVLR RYGSFLPRLS VSAGYAPYTL SRTYTTGYPV AEVQKTTMKS ADLTLSTSLN
LFNGFSDYAS LQASLKQERA AEYTLQRVLE SVVYDVTQTY FQVRLNQELL AIARENLLLA
QDQLTLTDRQ FQIGLKSMTD RYQQQADASE SALQVIKAET RMQRSMSELL RRLQIEPQTR
ILLIASPEEL KVTLSSKLDI DSLAATALER RTDLKSKLLE TDAAKWQTRV SRAPWYPRVD
LGFNVSTAGS EYLHNEYAYP PLSEQLRHTV GYSVSLNLNW AIFDGFQTRY NVESAKINQL
NQRLDYDDLK RDIVIDLQQS AGEYTSAFMQ IETANLSFTA AQSAYEGIKR KYELGAAGFV
ELSSARATLF NARSNLSQAT FNLALQKSIL DFTTGNITIP QLTESSIPLR
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