| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1631 |
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| Symbol | ddl |
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| ID | 6463210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1718473 |
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| End bp | 1719555 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727847 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | YP_002018485 |
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| Protein GI | 194336691 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCACGTA TTACAGTTGC TCTCATTTTT GGAGGCAGGT CAACCGAACA CGAAATATCA
ATCATCTCTG CAAAATCAAT AGCAGCCAAT ATCAGCGCCG AACGTTACAA GGTTATTCCG
CTCTACATTA CACATCAGGG AACCTGGCTC TGTGAGGGCA TTGCCCGCGA CATTCTGAAC
CTTGACCTCT CCGCTCTTTT GAGAAACTCA TCACCTGAAG CAGCAGCGAT GGCGCTTGAC
AGGATGGTTG AAGAGGCGGA GCAGAAACCC TTCAACCTCG ATTTCAGGGC TATCGGCATT
GAAGTGGCAT TTCTGACGCT TCATGGCACC TATGGAGAAG ATGGCCGCAT CCAGGGCTTT
CTGGATACCT GCAACATTCC CTATACAGGC TGCGGTGTAC TGGCATCAGC GCTCACTATG
GATAAAGCGC TCACCAAACT CTGTGTTGCA GATGCAGGCA TTGCTGTTGC TCCATCCATA
ACGCTTCTCA GTGCCGAGTA CCATGCCGAT ACGGAAAAAG TTCACTCCCG GATCGAAGAG
AAGTTTATCT ATCCATTTTT TGTCAAACCG GCAAACCTCG GCTCCTCAAT TGGAATCTCA
AAGGTGCATC ACCGGGAACA ACTCCCTGCA GCCCTAAAAA GCGCCTGTTC ACTCGACTCA
AAAATAGTGG TTGAAAAAGC AATCACAGGG CGTGAAATTG AGGTTGCTGT ACTTGGCAAT
GATGAACCGG AAGTCTCCGT TTGCGGCGAA ATCGAACCCG GCAGCGATTT CTATGACTAT
CATGATAAAT ACATTCACAA CAGTGCAAAA CTGTTTATTC CGGCACGCAT TCCCGACGAA
ATGCAGAGCG AGGTCAGGAG CATTGCACTC AAGGCATACA AGGCGCTGGG ATGCAGGGGT
ATGTCGAGAA TAGACTTTTT TGTTGACGAA AAGAGGGGAA CCATCGTCCT CAATGAAGTC
AATACCATTC CCGGCTTCAC CGATATCAGC ATGTTTCCTC GACTCATGGC TGCAAGCGGA
CACTCTTTTC CTGAACTTGC AGAGCGATTG CTGCAGCTTG CACTGGAAAC CCTGCGACCA
TGA
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| Protein sequence | MPRITVALIF GGRSTEHEIS IISAKSIAAN ISAERYKVIP LYITHQGTWL CEGIARDILN
LDLSALLRNS SPEAAAMALD RMVEEAEQKP FNLDFRAIGI EVAFLTLHGT YGEDGRIQGF
LDTCNIPYTG CGVLASALTM DKALTKLCVA DAGIAVAPSI TLLSAEYHAD TEKVHSRIEE
KFIYPFFVKP ANLGSSIGIS KVHHREQLPA ALKSACSLDS KIVVEKAITG REIEVAVLGN
DEPEVSVCGE IEPGSDFYDY HDKYIHNSAK LFIPARIPDE MQSEVRSIAL KAYKALGCRG
MSRIDFFVDE KRGTIVLNEV NTIPGFTDIS MFPRLMAASG HSFPELAERL LQLALETLRP
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