| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1624 |
|---|
| Symbol | |
|---|
| ID | 6463223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1712494 |
|---|
| End bp | 1713759 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642727840 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002018478 |
|---|
| Protein GI | 194336684 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2270] Permeases of the major facilitator superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.767884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTGCGAG AGAGGCAGAA ATATAAAGTG TTTTCCTGGC TGCTCTTTGA CTTTGCCAAC
ACTTCCTTCA GCGTGATGAT GGTCACCTTT GTCTTTCCGC TGTACTTCAA AAATGTTATC
TGCAAAGGGG AACCTTCAGG AGATGCCCTG TGGGGTTTCA GCGTCAGTCT CTCGATGCTG
CTGGTTGCCC TGATCTCTCC GGTTCTCGGG GCTGCAGCCG ATTATTCCGG AAAACGGAAG
CGTTTTCTTC TTTTTTTTAC CCTTACCTCG ATTGTTGCCA CAGCTCTGCT CTCCTTTTCG
GGCCCTGGAA TGGCTTTGGT AGCTGTTCTG CTCTTCGTTC TTGCCAATAT GGGTTTTGAG
GGTGGGCTTG TTTTTTATGA TTCCTATCTC AAGCAGCTTG CTTCTGCCAA GAGCATCGGA
AGGGTTTCAG GGTACGGCTT TGCCATGGGA TATCTTGGCG CCCTCTCCAT TCTGCTGCTG
GTTCAGCCGC TGCTCAGCAA GGGTATTGTT TTGTCCAATA TGCCGAATGT ACAGTTGAGC
TTTTTGGTCG TTGCGATTTT TTTTGCTCTT TTTGCCGCTC CGCTTTTTCT GGTGCTGCGG
GATGAAAAAA AAGGGGATAG GCCTGCAATT TCTTTTACTG CTATCCGTTG TTCTCTCAGG
GAGGTGAAGT ACACCGTTCA GCATATTATG AGCTATCCCG ACCTTGCCCG TTTTCTCCTG
GCCTACTTTT TCTACAATGA TGCTATTTTG ACCGTTATCG CCTTTTCGTC GATTTATGCC
CAGAACACTC TTGGCTTTAC GACTGGAGAG CTGATTCGGT TTTTTATGTT GGTGCAAACG
ACGGCCATTG CCGGTTCTCT TATTTTTGGT TTTGTGACTG ATAAAATCGG GCCGAAACGT
ACCATTGTCA TTACCCTCCT GATTTGGTTT GTTGTGGTTG TTGCGGCTAT CTTTGCAGAC
AGCAAGGAGC TCTTTTTTTA TACAGGAATG CTTGCTGGTA TGTCAATGGG GTCATCCCAG
GCGGCCTCCC GATCCATGAT GACCAGGCTG ACACCCCAGG AACATGTGAC CGAGTTTTTC
GGTTTTTATG ATGGTACTTT TGGTAAGGCT TCGGCCATAG CGGGGCCTCT TGTTTTTGGA
TTGGTATCAG CTCAGGCTGG GAGCCAGAAA GCTGCACTTG CCTCTCTGCT GCTTTTTTTT
ATTCTTGGTT TGCTGCTGAT GACGAGGGTC AGATCGGTTG GGAGCGGATC AACCCGTGTA
ACGTGA
|
|---|
| Protein sequence | MLRERQKYKV FSWLLFDFAN TSFSVMMVTF VFPLYFKNVI CKGEPSGDAL WGFSVSLSML
LVALISPVLG AAADYSGKRK RFLLFFTLTS IVATALLSFS GPGMALVAVL LFVLANMGFE
GGLVFYDSYL KQLASAKSIG RVSGYGFAMG YLGALSILLL VQPLLSKGIV LSNMPNVQLS
FLVVAIFFAL FAAPLFLVLR DEKKGDRPAI SFTAIRCSLR EVKYTVQHIM SYPDLARFLL
AYFFYNDAIL TVIAFSSIYA QNTLGFTTGE LIRFFMLVQT TAIAGSLIFG FVTDKIGPKR
TIVITLLIWF VVVVAAIFAD SKELFFYTGM LAGMSMGSSQ AASRSMMTRL TPQEHVTEFF
GFYDGTFGKA SAIAGPLVFG LVSAQAGSQK AALASLLLFF ILGLLLMTRV RSVGSGSTRV
T
|
|---|
| |