| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1617 |
|---|
| Symbol | |
|---|
| ID | 6463241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 1705411 |
|---|
| End bp | 1706820 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642727834 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_002018472 |
|---|
| Protein GI | 194336678 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0136432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATCA TACAATCAGA AACTCTCGTC TCGCCGCTCG ACACCGCCTC AAATAGTTCC
GAGGAACTTC TCCACCAGCT TGCTGCACAG CAAAAATCAC GCAAGAAATG GCTTCTCATC
CAGCCGGTAA GCAACACCAG CATGATGGTC GATTCCGGTA CGGTCAGTAT GCCGTTAAAC
CTGATTATGG TTGCCACCAT CGTCGGAACG CTCTTTGACG TCACCTTTAT CGATGAGCGG
CTTGGAGACA AGATTCCTGA AGATTTTTCC GGATTTGATG TCATAGCCAT CACCTCGCGA
ACACTCAACG CATCACAAGC CTACCGGATC GGCGACAGGG CATTAAAACA GGGCAAAACC
GTTATCCTCG GCGGAGTCCA TCCCACCATG CTGAACGAAG AGGCCTCCCT GCACTGCACC
AGCGTGGTCT ACGGTGAAAT TGAGTCCATC TGGACAGAAC TTGCCACTGA TGTGCTGAAA
GGCAAAATGC AGCAGGTATA CCGGGCAAAG GAGCTAAAGT CGATGAGCGA CATGCACCGC
CCCGATTTCA GCTATGCCCT TTCATCAAAA AGCTCGAAAA AATACAGCTC ACGCATTCCC
CTGCTTGCAA CAAAGGGTTG CCCTGTCGGG TGCAACTTCT GCACAACACC AACCATTTAC
GGCAAGAACT ACCGCTACCG CGAGCTTGAC CTGGTACTCG ATGAGATGCG TTACCATCAG
GAGCGGGTTG GGAAGAAAAA TGTCAATTTT TCCTTCATGG ACGACAACAT CAGTTTCCGT
CCCAAGTATT TCATGACCCT GCTTGAAGAG ATGGCCAAGC TTGGCGTACA CTGGAACGCC
AATATCTCCA TGAACTTTCT CGACAAACCC GAAGTTGCCG AACTTGCTGG CCGCTCCGGC
TGCGATCTGC TCAGCATCGG GTTTGAATCG CTCAATCCGG AAACCCTGAA AACCCTCCAC
AAGGGCTCCA ACCGTCTCAG CAACTATGAA CAGGTTGTAA GCAATCTCCA TAAAAACAAA
ATTGCCATCC AGGGATACTT CATGTTCGGT TTCGACAACG ACACCGAAGA GAGCTTCCAG
CTCACCTACG ACTTCATCAT GAAAAACAAG ATCGAGTTTC CGGTATTTTC ACTGGTCACC
CCCTTCCCCG GAACACCCTA TTTCGATGAA ATGAAGCCCC GCATCCGCCA TTTCGACTGG
GACAAGTACG ACACCTACCA CTACATGTTC GAGCCAACCA ACATGACTGG CGAAAAAATG
CTCTCAAACT TTGTCAAGCT CCAGAAAGAG GTCTACAAGG GAGGCGCCAT CATGCAGCGC
ATGGCAGGCA AACCGCTCAA CTGGGTCTGG CTCGCCAACT ACGCTATGAA CCGCTTCACC
AGCAAGCTGA CGCCGGAATA TTATTACTGA
|
|---|
| Protein sequence | MQIIQSETLV SPLDTASNSS EELLHQLAAQ QKSRKKWLLI QPVSNTSMMV DSGTVSMPLN
LIMVATIVGT LFDVTFIDER LGDKIPEDFS GFDVIAITSR TLNASQAYRI GDRALKQGKT
VILGGVHPTM LNEEASLHCT SVVYGEIESI WTELATDVLK GKMQQVYRAK ELKSMSDMHR
PDFSYALSSK SSKKYSSRIP LLATKGCPVG CNFCTTPTIY GKNYRYRELD LVLDEMRYHQ
ERVGKKNVNF SFMDDNISFR PKYFMTLLEE MAKLGVHWNA NISMNFLDKP EVAELAGRSG
CDLLSIGFES LNPETLKTLH KGSNRLSNYE QVVSNLHKNK IAIQGYFMFG FDNDTEESFQ
LTYDFIMKNK IEFPVFSLVT PFPGTPYFDE MKPRIRHFDW DKYDTYHYMF EPTNMTGEKM
LSNFVKLQKE VYKGGAIMQR MAGKPLNWVW LANYAMNRFT SKLTPEYYY
|
|---|
| |