| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1615 |
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| Symbol | |
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| ID | 6463251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1703843 |
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| End bp | 1704574 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727830 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002018470 |
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| Protein GI | 194336676 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0247276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGCAA CAGCCATTAT AGCCGCAAGC GGTATCGGAA AACGGATGCA GCTCAGGGAG
GGTGAGAGCA AACAGTTACT TGAAGTCGGA GGGTTTCCGG TTATCTACCA TACCCTGAAG
GCTTTTCAGA TGGCCTCTTC GGTTAAAGCC ATCTATATTG CCACCAGGCT GGAGAACAGG
AGCATACTCG AAGAACTTGC TGCTGCCTCG GGTTTCAGTA AGCTGAAAGC CATTATCGAG
GGCGGAAAAG AGCGACAGGA TTCCGTTTAC AACTGCATCC GTGCCATTGA GGAAGAAAAA
CGCCTGACAG GTGCTTCTGC AGAGATCATT CTGGTTCATG ATGGTGCACG CCCCTTTATT
CGTTCTGAAG AGATTGATGA AATTGCGCGC CTCTCCATGC AGTATGGCGC CTGTGTTCCG
GCAAACAGGC CAAAAGACAC GATCAAGTAT GTCGGGGAGA ATCCGGAGTT TTTTGGTGAA
ACCCTTGACC GCAGCAAACT TCTCCAGGTA CAAACTCCCC AGGGTTTTCA AAGCAACCTC
TTGATCCAGG CGCATGAGCA GGCAGAACTG GAAGGGTGGT ATGCAACCGA TGACGCTGCG
CTGGTCGAGC GTTTTTTTCC TGAACAACCC GTAAAAATTT TTGAAACCGG CTATCACAAT
ATCAAAATTA CGACACCGGA AGATATTCCC GTTGCCGAGG CGATATTCAG CCAGATTTCA
ACACGGAGTT AA
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| Protein sequence | MQATAIIAAS GIGKRMQLRE GESKQLLEVG GFPVIYHTLK AFQMASSVKA IYIATRLENR
SILEELAAAS GFSKLKAIIE GGKERQDSVY NCIRAIEEEK RLTGASAEII LVHDGARPFI
RSEEIDEIAR LSMQYGACVP ANRPKDTIKY VGENPEFFGE TLDRSKLLQV QTPQGFQSNL
LIQAHEQAEL EGWYATDDAA LVERFFPEQP VKIFETGYHN IKITTPEDIP VAEAIFSQIS
TRS
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