| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1610 |
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| Symbol | |
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| ID | 6463262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1696679 |
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| End bp | 1697377 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642727825 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002018465 |
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| Protein GI | 194336671 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAACA AGGTATTTCT TATTACCGGG GCATCAACCG GTATCGGTGA AGCAACAGCA
AGGCGTGCTG TGGAAGCGGG ATTCAAGGTG GCGCTTGTCG CCCGTTCTAC CGAAAAGCTT
GAACGATTGC AGGCAGAACT GGGCCCTGAG AGGGCTCTTG CCATAACCTG TGATGTTGCA
AACTGGCAGT CGCAGCAAAC AATGGTAGAA ACGACCCTGA AACACTTCGG ACGAATTGAT
GTGGTTTTTG CAAACGCTGG CTTTTCGAAG GGCTCAACCT TTTATGGCGG AGAGGATAAG
CCTGAAGAGT GGAAAGAGAT GGTGATGGTC AATGTCTATG GCGCTGCAGC CACGGCTCGG
CTGACCCTTC CTGAACTGGT AAAAAACAGG GGTCACCTGC TGATTACCGG CTCTGTAGTG
GGACGTATCA CCTCCATCAG GAACCTCTAT TCAGCAACAA AATGGGCTAT CACCGGCATG
GCACAGGCTA TCCGCAATGA GATGGCGGAA ACCGGGGTGC GCGTCACCCT TGTTGAACCC
GGAGTTGTCG ATACCCCTTT CTGGGAGGCT CTGCAAAAAC CCTGCACCGC AGAACTTCAG
CCGGATGATA TTGCCCGCGC AGTCATGTAT GCCGTCAGTC AGCCCGCGCA TGTTGATGTC
AATGAAATCC TGATCCGCCC GACAGGTCAG CCCCATTGA
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| Protein sequence | MKNKVFLITG ASTGIGEATA RRAVEAGFKV ALVARSTEKL ERLQAELGPE RALAITCDVA
NWQSQQTMVE TTLKHFGRID VVFANAGFSK GSTFYGGEDK PEEWKEMVMV NVYGAAATAR
LTLPELVKNR GHLLITGSVV GRITSIRNLY SATKWAITGM AQAIRNEMAE TGVRVTLVEP
GVVDTPFWEA LQKPCTAELQ PDDIARAVMY AVSQPAHVDV NEILIRPTGQ PH
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