| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1600 |
|---|
| Symbol | |
|---|
| ID | 6463286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1688489 |
|---|
| End bp | 1689544 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642727818 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002018458 |
|---|
| Protein GI | 194336664 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGCA ACTATACTGA AAAGTCCCTT GTCTTGGTTA TTGGCGCAGG GGCAAGCAAA
GAGGTGAATC TGCCTGTTGG TTCTGAATTG AAAAAGCAAA TAGCAAAGGT GCTCGACATA
CAATTCGAAC ACTACCAGAA AAAAAGTGGT GACGATATTA TCAGTGATTC TTTTAGGATT
CTGGCTACGG ATGGTAATAT CAATCCATAT TTGGGAGCGG CATTTCGGAT TCGCGATGCA
ATGCCTCAAG CTATTTCTAT TGATAATTTT ATTGATTCAC ACCAGTCAGA TGAAAAAATA
TCAATTTGCG GAAAGTTAGC TATTGCTCGA TGTATTCTTA CTGCAGAGTC TAAAAGTTTG
TTAAAAATTG ATCGCAGTAA CATTTATAAT AAACCTAATT TCTCGGTTCT TGAACTAACT
TGGTTCAACG CATTTTTTCA GCTATTGACC GAGAACTGTC AGCAAGATGA TCTTCCAGAA
AGATTGTCAA AAGTTGCGAT AATATCCTTC AACTACGATA GATGCATCGA ACACTTCTTG
TTTTGGTCAG TCCGAAATTA TTATGGTATG ACGGCCAAAG AAGCAAGTGA GGTTCTGACT
CATTTAGAGA TACATCATCC GTATGGAATG GTTGGAAAAC TTCCTTGGCA GCAGGGTGCG
CACGAAGGAT TTGAATTTGG TGATACCCCT ACTCCCAAGA AACTATTGTC CCTCGCAGGA
GAACTTCGGA CATTCACTGA AGGAATTGAT CCTACGAAGA GCGATATTTC AGCAATACAG
GCAGCTTTAT CTACTGCCCA ACGAATTGCG TTTCTCGGTT TTGCATTTCA TCGCCAAAAC
ATTGAATTGC TTTTACCTGG TCAGAACATG GGGGGAAAAG AAAGGAATTG TCGAGTTTAT
GCAACTGCCT ACGGAATATC ATCTCCAGAT ATTCGGCTCA TTAAACAGGA TATCATCAGT
CTTGCTGGAA TATCTGATGA GCACATATAT GTTGAGATTG GTTTAAAATG TTCGGAATTG
TTTAGCGAGT TTTGGCGGAG TCTCTCACTT CAGTGA
|
|---|
| Protein sequence | MNSNYTEKSL VLVIGAGASK EVNLPVGSEL KKQIAKVLDI QFEHYQKKSG DDIISDSFRI
LATDGNINPY LGAAFRIRDA MPQAISIDNF IDSHQSDEKI SICGKLAIAR CILTAESKSL
LKIDRSNIYN KPNFSVLELT WFNAFFQLLT ENCQQDDLPE RLSKVAIISF NYDRCIEHFL
FWSVRNYYGM TAKEASEVLT HLEIHHPYGM VGKLPWQQGA HEGFEFGDTP TPKKLLSLAG
ELRTFTEGID PTKSDISAIQ AALSTAQRIA FLGFAFHRQN IELLLPGQNM GGKERNCRVY
ATAYGISSPD IRLIKQDIIS LAGISDEHIY VEIGLKCSEL FSEFWRSLSL Q
|
|---|
| |