Gene Ppha_1573 details

Gene Information

• Locus tag: Ppha_1573
• ID: 6463340
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: -
• Start bp: 1664751
• End bp: 1666637
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 642727794
• Product: heat shock protein 90
• Protein accession: YP_002018434
• Protein GI: 194336640
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0326] Molecular chaperone, HSP90 family

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00534584
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAACA ACAGTAATAA TGGCACATCG CCGGTTCAGG AGTTTGAATA CAAGGCTGAG 
ATGAAGCAAC TGCTCGACCT GATTGTTCAT TCGCTCTATA CCCATCCCGA AATATATCTC 
AGAGAGCTGA TTTCCAACGC CTCTGATGCG CTCAGCAAGG TGCGTTTCAA TGCCCTGACC 
GATCAGGAGA TGCTCGACAA GGAGGTCGAT CTCGCCATCC GTATCACCAT TGATCCGAAA 
GAGATGACCT TTGTTATCGA GGACAGTGGC GTCGGCATGA CAGAAGAGGA GTTGATTGCC 
AACCTCGGTA CGGTTGCAAA GTCGGGGACG TTGGGCTTCA TGCAGTCGCT CAAAGAGCAG 
CAGAAGCAGC TTGATGGCAA CCTTATCGGT CAGTTTGGCG TCGGCTTCTA TTCGGTTTTC 
ATGGTAACGG AAGAGGTTAC CGTTGAGACA AGAAGCTCCC ATCCCGGTTC GCAAGGCTTC 
CGCTGGCGCT CTGGTGGTCA GGGTACCTAC ACGATTGAAA AGATCGACAA GGCTGAGCGG 
GGAACAAAAA TTTCCTTCAA ATTCAAAGAG GAGTCGAAAG AGTTTGCCGA GGAGTACCGT 
GTTGAGCAGA TTGTCAAAAA ATATTCAAAC TTTGTTGATT TCCCCATCTA TCTCGGCGAG 
AAGCAGCTCA ACAGTATCAC CGCCCTCTGG CAGCGTTCAA AAAATGAGCT GAAGGATGAG 
GAGGTCAATG AGTTCTACAA GTTCATCGCC AACGATTATC AGGATCCCCT CGACTACCTG 
CCTGTCTCCG TCGAAGGAAT GGTCACCTTT AAAGCGCTTC TCTTTTTGCC AAAAGAGGCT 
CCACCCGAGA TGCTGTATCG TCAGGGTGAA CTCGAAAACC ACGGGCCGCA GCTCTATGTC 
AAAAAGGTGC TGATCCAGAA TGAGTGCCGT GACCTTCTGC CCGAGTACCT TCGTTTTATC 
GCAGGCGTTG TTGACACCGA AGATCTTTCG CTCAATGTAT CAAGAGAGGT TGTTCAGTCC 
AGCCCGGTGA TGGCCAAAAT CCGTCAGATC CTCACCGGCA AGATTCTTGG CTGGTTTGAA 
TCGCTTGCCA AAGAGCAGCC TGAGAAGTTC AAGACCTTTT ACAAGGCATT CGGCCCGATT 
ATCAAAATCG GTCTGAACAC CGACTTTACC AATCGGGAAA AACTGATTGA GCTGCTGCGG 
TTTGAAAGCA CAAAAACTGT CGATGGTGAA TATGTGACGC TCAAAGAGTA CAGTGAAAGG 
ATGGGCGCCG ATCAGAAAGA GATCTATTAC CATTCCGGAA CCAGCAAGGG ACAGCTTCTT 
GCCCATCCCA ACCTTGAGTA TTTCCAGGAG ATGGGTATTG AGGTCCTGTT GCTCAGCGAT 
CCTGTTGACG TTTTTGTGAT TCCCTCCATT CATGAATACG ATAAAAAGCC GCTGAAATCC 
ATTGAAAAGG CAGATATCGA TTTTTCAAAG AAGAACAAGG AGACGCCGGA ACCGATTGCA 
GAGAATCTTC TTTCGCCGGT GCTTCAGCTT TTCCGTGAAA CCCTCGGTGA AGGAGTTGAG 
GATGTCATTG AGTCGCATCG GCTTGTTAAC TCCCCGGTAA CACTGGTGAG TGGCAAGGAT 
GGTCTCGACA GCCAGATGGA AAAGATGATG AAGATGATGA GGAGTGATAT GCCCGCCGGA 
AAAAGGATTC TCGAGGTCAA TACCGCACAC CCCATTATCA GAAATCTTGC CGGATTGATC 
AGTGCAGATC CCTCCAATCC GCTCATTGTA ACTGCGATGA AACAGCTTTA TGAAGGTGCA 
TTGTTTCTTG AGGGTGGACT TGATTCAACG ACCGGATTTT TATCAAGAAT GAATGAGTTG 
ATCGAGGCCG CGACGCTTTC CAGATAG 

 

Protein sequence

MSNNSNNGTS PVQEFEYKAE MKQLLDLIVH SLYTHPEIYL RELISNASDA LSKVRFNALT 
DQEMLDKEVD LAIRITIDPK EMTFVIEDSG VGMTEEELIA NLGTVAKSGT LGFMQSLKEQ 
QKQLDGNLIG QFGVGFYSVF MVTEEVTVET RSSHPGSQGF RWRSGGQGTY TIEKIDKAER 
GTKISFKFKE ESKEFAEEYR VEQIVKKYSN FVDFPIYLGE KQLNSITALW QRSKNELKDE 
EVNEFYKFIA NDYQDPLDYL PVSVEGMVTF KALLFLPKEA PPEMLYRQGE LENHGPQLYV 
KKVLIQNECR DLLPEYLRFI AGVVDTEDLS LNVSREVVQS SPVMAKIRQI LTGKILGWFE 
SLAKEQPEKF KTFYKAFGPI IKIGLNTDFT NREKLIELLR FESTKTVDGE YVTLKEYSER 
MGADQKEIYY HSGTSKGQLL AHPNLEYFQE MGIEVLLLSD PVDVFVIPSI HEYDKKPLKS 
IEKADIDFSK KNKETPEPIA ENLLSPVLQL FRETLGEGVE DVIESHRLVN SPVTLVSGKD 
GLDSQMEKMM KMMRSDMPAG KRILEVNTAH PIIRNLAGLI SADPSNPLIV TAMKQLYEGA 
LFLEGGLDST TGFLSRMNEL IEAATLSR