| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1569 |
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| Symbol | |
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| ID | 6463345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1659989 |
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| End bp | 1661521 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642727790 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit |
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| Protein accession | YP_002018430 |
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| Protein GI | 194336636 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACT TCAGGCACTC AATTCTTGCA CTCATTACCG AAACCTCGGC CAACCTGCCG
AGTGATGTTC GCTGTGCACT CGCAGCCGCT ATTGACCGGG AAGATCCACT CTCCCAGGCA
GGCCTTGCCA TGTCAACCAT TTCGGTCAAT ATCGACATGG CTGTCGATAA CATTTCACCG
ATTTGCCAGG ATACCGGTAT GCCAACCTTT TTCATCCACA CTCCTCGCGG AACCGATCAA
CTCTTTATGA AAGAGGAGAT TGAAGCGGCT ATTGCGGAAG CGGCCCGAAC CGGTAAACTC
CGTCCCAATG CGGTCGATGC CATAAGTGGC AAGAACTCAG GCAACAACCT TGGCGAACAT
TTTCCGGTAA TCCATTTTGA GCCCTGGGCA AAGGATGAGA TTGAGGTGAA GCTGATTCTG
AAAGGTGGTG GTTGCGAAAA TAAAAACATT CAGTACTCAC TGCCGGAAGA AATTCCCGGA
CTTGGAAGCG CTTCACGCGA CCTTGACGGC GTGCGCAAAT GCCTGCTTCA TGCGGTTTAT
CAGGCGCAGG GGCAGGGGTG CAGCCCCGGT GTTATCGGCG TTGGAATCGG TGGCGACCGT
ACCAGCGGTT TTGACCTTGC CAAGAAGCAG CTCTTCCGCA CCATTGACGA CCGTAACCCC
GACAGTGAAC TTGATGCTCT CGAACAGGAT ATTCTTGAGA AAGCCAATAC GATGGATATC
GGCCCCATGG GTTTTGGCGG AAAAACCACC CTCTTTGGAT GCAAAATCGG CAAATCACAC
CGCGTTCCGG CAAGCTTTTT TGTCTCCGTA GCCTACAACT GCTGGGCATA CCGCCGTCTT
GGCGTGCTGC TTGATCCGGA GAGCGGCTCA ATCAAGAGCT GGCAGTACAG AGCTGCCGAT
GAGATCAAAC GCATGGCCAA AGGCGAGGGA ATGGCGCTGA CCGGAAAAGA GGTTATCCTG
CAGGCTCCAC TTACTGAAGA GCAGGTCAGA TCGCTCAAGG TTGGCGACGT GGTGCTTATT
AACGGCGCCA TGCATACCGG TCGTGATGCC TTCCACCACT ATATCATGCA CCACGACCTG
CCCGCCCATC TCGATACAAC AGGAGGAATT CTCTTCCATT GCGGACCGGT TATCATGAAA
AATGAGGATG GCAGTTACCG CGTTACCGCT GCCGGGCCGA CCACCTCAAT CCGTGAAGAG
CCTTTCCAGG CGGATGTCAT CAAAAAACTT GGACTGAGAG CAATTATCGG TAAAGGGGGG
ATGGGCCCGA AAACCCTCAA GGGGTTGCAG GAACATGGAG CCGTCTATCT CAACGCCATC
GGAGGCGCAG CACAGTATTA CGCCCGTTGC ATTGACCGGG TGACCGGAGT TGATTTTCTT
GAAGAGATGG GCGTTCCCGA AGCGATGTGG CATCTGGAGG CAAGCTCCTT TCCGGCTATT
GTTACCATGG ATGCACACGG CAACAGCCTG CACAGCATCG TCGAAGAAGA GTCGTTCCGT
CAACTCGGCA CATTCGCTAC TGATGCCCAC TGA
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| Protein sequence | MENFRHSILA LITETSANLP SDVRCALAAA IDREDPLSQA GLAMSTISVN IDMAVDNISP
ICQDTGMPTF FIHTPRGTDQ LFMKEEIEAA IAEAARTGKL RPNAVDAISG KNSGNNLGEH
FPVIHFEPWA KDEIEVKLIL KGGGCENKNI QYSLPEEIPG LGSASRDLDG VRKCLLHAVY
QAQGQGCSPG VIGVGIGGDR TSGFDLAKKQ LFRTIDDRNP DSELDALEQD ILEKANTMDI
GPMGFGGKTT LFGCKIGKSH RVPASFFVSV AYNCWAYRRL GVLLDPESGS IKSWQYRAAD
EIKRMAKGEG MALTGKEVIL QAPLTEEQVR SLKVGDVVLI NGAMHTGRDA FHHYIMHHDL
PAHLDTTGGI LFHCGPVIMK NEDGSYRVTA AGPTTSIREE PFQADVIKKL GLRAIIGKGG
MGPKTLKGLQ EHGAVYLNAI GGAAQYYARC IDRVTGVDFL EEMGVPEAMW HLEASSFPAI
VTMDAHGNSL HSIVEEESFR QLGTFATDAH
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