Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1568 |
Symbol | |
ID | 6463347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1658015 |
End bp | 1659940 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642727789 |
Product | Oxaloacetate decarboxylase |
Protein accession | YP_002018429 |
Protein GI | 194336635 |
COG category | [C] Energy production and conversion |
COG ID | [COG1038] Pyruvate carboxylase [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00759156 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TCAGATTTAT GGATGTCTCA TTCCGTGACG GGTTTCAGTC CTGTTTTGGT GCGAGAGTAA AGACCGAGGA CTTTTTGCCT GCCCTTGAAG CTGCCGTTCA TGCCGGTACA GACAATTTTG AAATTGGCGG TGGAGCCCGC TTTCAGAGCC TCTATTTCTA TTGCGAAGAG GATGCTTTTA CCATGATGGA TGAAGCCCGC AAGGTTGTGG GGCCGGATAT CAACCTGCAG ACCCTTTCAC GAGGAGCCAA CGTCGTTGGC CTTGTTTCGC AGTCACGCGA TATTATTGAT CTCCATGCCC GTCTCTTCAA AAAGCATGGT ATCACCACCA TCCGGAATTT CGACGCCCTG ATGGATGTCC GCAATCTCTC CTACTCCGGT CAGTGCATTC ACGATGCAGG GCTTCGCCAC CAGGTCGTTG TTGCCATGAT GGGCCTTCCA CCCGGATTGC AAGAGAGCTA TTGCCATACC CCGCAGTTCT ATCTCGACAA GCTGCGGGAG ATACTTGATG CCGAAATTCC ATTCGACAGC GTTGCTTTCA AGGATGCTTC AGGCACAACA ACTCCGGCTA TTGTTCATGA AACCATCAAG GGAGCACGGA AGATGCTGCC CGAAGGCACC GAAATCCAGT TCCATACCCA CGACACGGCA GGGATGGGCG TAGCCTGCAA CTATGCCGCC ATCACCGGTG GAGCTGACAT TATTGATCTC TCCATGGCTC CGGTCAGTGG AGGAACCGCC GAAGTGGATA TCCTCACCAT GTGGCAGAGG CTCAGAGGCA CCGAATACAC CCTCGACATA GACCAGGAGA AATATCTTGA GGTGGAGGCG CTCTTTATTG ATCAGATGTA CAAGTACTAC ATGCCCCCTG AAGCCACAGC GGTCAATCCG GTCATCTCCT TCTCACCCAT GCCCGGCGGA GCCCTCACGG CAAATACCCA GATGATGCGC GACAATAACA CGCTGCACCT CTTCCCCGCA GTAATCAACA ACATGCGTGA GGTGGTGGTC AAAGGAGGCT TTGGCGCATC GGTCACCCCG GTTTCACAAT TCTATTTCCA GCAGGCTTTT GCCAACACCA TTCAGGGCCA CTGGAAAAAG ATCACCGACG GTTATGGCAA AATGGTGCTC GGCTACTTCG GCAAGACCCC TGCCCGCCCT GACGATGAGG TTGTCAGGCT CGCATCCGAA CAGCTCGGTC TTCCTCCAAC GGTTGAAGAT GTGCACGATA TCAACGATCG CAATCCGGAA CTTGGCGTAG CCTATAATAA ATCGCTGCTC CATGAAGCCA ACATTCCGCA GACCGACGAA AACATCTTTA TCGCAGCAAC CTGCGGCGCC AAAGGTATCG CTTTTCTTCA GGGAGATTGC TCAACCGGTA TTCGCTACAA GGCCGATATT GCCGTTGAAA TCAAGGCAAC ACCAAGAGCA GAGGTGGTTG CGGCCTACCA TGAGGCACAC AAACACGATA TTCACCAGGA AGAGGTGAAC CATCGGCTTA AGGATCTCTT TTCCAAACTG CCACCTGCAG CGCCGGTTGC GCCTCCGGGA GCATCAAAGG TGATCTCAAT GGCAGGCAAC TTTACCGTTT TTGTTGATGG AGCCCCCTTC ACCGTCTCCT TTGCCGAAGG CTCCGCCATC AATCCCCAAA CGGTTGCCCT GCCATCAGCG GAAGGCTCTC CTGAAGCCCA CCACCCGCAT CCAGGGACAC CAGTGCCGGC GGTTATGCCC GGCAACGTCT TCTCGATTGC CGTCAAGCTT GGTGATGAGG TCAGGGAGGG AGAAGAGGTC GCCATCATCG AAGCCATGAA AATGGAAAAC TCCGTCAAAG CCCCCTGTGG CGGAAGAATC CTCTCCATCA CGGTAGCCAA AGGCGACTCC GTCGGAATGG GAGAGACCAT GATGACCATC GGATAG
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Protein sequence | MKKIRFMDVS FRDGFQSCFG ARVKTEDFLP ALEAAVHAGT DNFEIGGGAR FQSLYFYCEE DAFTMMDEAR KVVGPDINLQ TLSRGANVVG LVSQSRDIID LHARLFKKHG ITTIRNFDAL MDVRNLSYSG QCIHDAGLRH QVVVAMMGLP PGLQESYCHT PQFYLDKLRE ILDAEIPFDS VAFKDASGTT TPAIVHETIK GARKMLPEGT EIQFHTHDTA GMGVACNYAA ITGGADIIDL SMAPVSGGTA EVDILTMWQR LRGTEYTLDI DQEKYLEVEA LFIDQMYKYY MPPEATAVNP VISFSPMPGG ALTANTQMMR DNNTLHLFPA VINNMREVVV KGGFGASVTP VSQFYFQQAF ANTIQGHWKK ITDGYGKMVL GYFGKTPARP DDEVVRLASE QLGLPPTVED VHDINDRNPE LGVAYNKSLL HEANIPQTDE NIFIAATCGA KGIAFLQGDC STGIRYKADI AVEIKATPRA EVVAAYHEAH KHDIHQEEVN HRLKDLFSKL PPAAPVAPPG ASKVISMAGN FTVFVDGAPF TVSFAEGSAI NPQTVALPSA EGSPEAHHPH PGTPVPAVMP GNVFSIAVKL GDEVREGEEV AIIEAMKMEN SVKAPCGGRI LSITVAKGDS VGMGETMMTI G
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