| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1565 |
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| Symbol | |
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| ID | 6463354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1653192 |
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| End bp | 1656317 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642727788 |
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| Product | putative signal transduction protein with Nacht domain |
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| Protein accession | YP_002018428 |
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| Protein GI | 194336634 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5635] Predicted NTPase (NACHT family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCAG ATACGAGAAA TGCCACCCCT GAATTTTCGC CGGATGAGCT GCTGATTTTC
ATCGGGCACA GTGACGATGC TTCGGCGGAA GCTGATGCAA TGCTTGAACT GAAAGAGGAG
ATTGAGCATG ATTTTCGCCG TTTGCTTACG TCCAATAATC ATCGTTCACG TTTTCGCCGA
ATCAAGTTTT GGGAGTGGAG ATATGATGCA TTGGCGATAC CCGGCGGCCA GGATGTGGTT
GTGGCACCGG CTCTTGAACG TGCACAGATA GCTGTTTTTC TCTTCAAAAA ACGAGTTGGC
TGCGTGACTC GTCAAGAGCT TGATATTACA AGAAAGCAGA GCAGGGATAC TCATGTTTTT
GCTTTTTTCC CGCACAATCA GCCTCTGGTA AATTCGTTTG ATACTCTTGA TGATGAAATT
CAGGCGACTT CAGACTGGCT TGAATTAAAG AAGTATCAGA AGAGCCTGAC CAGTGATTGG
ACTCAGAGTG GGTCGTCTTC TGTTACTCCT TTCCCAAAGT ATAAGGATCC AAAAGATCTG
CAAAAAATAG CGGCTGACAG GCTTTGTACT GCTCTTTCTG TTATTCTCTC TCTCGAATCT
TCTATAGTTC GTCCAACTCC GTTACAGCAG GTAAACAGTG CTGCCGAACT TCTTCGCTGT
TACCACGCCA CCCTGAAGCA GCAACTTGGC AACATTACGC TGACCGGATC ACCAGCGCTG
GAGCATTTTT CGGTAAAGCT CTCCGAGACT TTTGTATCGC TCAGTTTGTC GGCTGCGTCG
CGATGCGAGG TGCGCAGTAG TGCTGGCGGT GAAGGGTGCG ATGAGGCGGA GTATCAGCAT
AGCAGCACAC CCGAAAAGGT AATGAGTTTT GTGTTTCAGC ACCATCCACT GTTGCTCGTC
ATTGGTGATC CGGGTTCGGG GAAAACCACA CTGCTCAAAT ATTATGCGCT CTCCTGCCTC
GACAACGGTC GGCACAAGGA GTTCGGGTTC AATGAGCCGG TTCATGTTTT TTTTCTGCCG
TTGCGCGAAC TGAAACAAGA TGAGCATGGA GCTTATGCGT CGTTACCGGC AAATCTTGCT
GTGTGGTCAA GCAAACAGTT TCTCAAAATT GAGGAATCCC TCTTTTCCGG TTGGCTTGAG
CGGCCTTCAA CACTGATGCT CCTTGATGGA CTTGATGAAA TCAGCGATGT TCACGACCGG
ATAGCGGTAT GCAAATGGAT TGACCGGACG GTCGGACGTT TTACCAACGC AAAGTTTGTG
GTGACCTCAC GAAGCACGGG GTATCGGAAG GGAGATGGCA TTGAAATTGA ATCAAGCCAT
TTGCGGGCGG ATATTATGGA TTTTTCCAAA GAGCAGCAGA GGGAGTTCTT GCACCGCTGG
TTCAGGGCGG CATTTCTCGG TGAGTTGCCG CCAGCCGTCG AAGATGATAC GGTGTGGCGC
GGCCAGCAGG AGCAAAAAGC TGCCACAAAA GCTGATGCCA TCCTGTTGTT TCTTGGTCAG
GAGAAAAACC GGAGCTTGCG CCCTTTGGCG GGTGTGCCGC TCTTGTTGCA AATCATGGCG
ATGCTCTGGA AAGATCGGCA GTATCTGCCC GGCAGCCGCT TAAAGCTCTA CGATGCGGCA
TTGAACTACA TGCTCGATTA TCGTGACCGT CGGAGGGGAA TTGATTCGCT GCTCGTGGCG
GAGGATGCCC GACGGGTACT GAGTCCGGTC TCGCTCTGGA TGCAGGAGAC GCTGAAAATA
GATGAGGTTG ACCGGGCTGA GATGCAGCAG CAGATGCAGG TACAGCTCGA CACGCTCTCC
AATTCGCGGC CTGCATCGGA TTTTTGCCAA AGCCTTGTTG ACCGTGCGGG AGTATTGGTG
GAGTATGGCG AAAAGGAGTA TCTCTTCCGC CATAAATCAT TCCGCGAATA TTTGGCGGGC
GTTCAGTTGG TGAAAAATAT CCACAAACCG AACGCTCTCG ACAAGCTGGT GAGCCATTTT
GGCGACGACT GGTGGACAGA GGTGTTTCGC TTTATTATTG GCCATGTTGA GGATGCAGAA
CTGTTCGACA GTTTCATGCA GAAGCTTTTT GATTCACCGG TCACTGAAAA CTTGACACAA
AAGCAGCAGG ACTTGCTGAT TGCCCTTGTT GAGGAGGCGC CGCAACGGAA GATTGATGCC
CTGCGCCAAA AGCTGCTTGA TCCGGCGACC ACGCAAAACC GGCAGCGCTA TTTGCTTGAG
TGCCTGAAAA CTATCGCAAA ACCTGAAGCG CTTTCCGTTG TGACGGAGTT CAAGCAGTTG
GGGTTGTCGA AAGAGGAACG GGTTATTGTT GCTGTAACAC TCGACAAGCT TGGTGCAGAG
TACATCCTGA TCAAGGGTGG GACATTCATC TATTCTCAGA CGCAGAAGCC GGAAACCGTG
CAAGAGATGT ATGTTGCAAA ATACACGGTG ACCAACCAGC ACTATCGCCG CTTTATCGAC
TATCTCGATG CAAAGGAGCC GGAATTTGCT GAAAGAGTGT CTGTTGAAAC ATACCGAAAG
AGCCTGCATG AGCTGGCATC GGGCATAGAA GGATTCAGCG AGTGGTTGAA AAAAGAACCC
TCTTTGGTCA GCCGCTTTTG CTCACGTTAT GATGAAGATA AACGATTCAA CAAGGATGAG
CAGCCGGTTG TCGGGGTAAG CTGGTATGCC GCCAAAGCCT GGTGCCTCTG GCTTTCGCTG
CTTGAAGGGG AGAGTGCACG GTACCAGCTT CCGGATGAAG TGCAGTGGGA GTGGGCCGCA
GGAGGCCAGC GCGACAAGCC GGATAAAGTA TTAAAGGTTA GGGACTATCC CTGGCCCGAA
GAGAAGGGTA AGCCTGATAA ATCAAGGGCT AATTATAACA ATCATGAGGG GGGAACGATA
CCTGTAGGCC GTTATCCTGA GGGAGCGACG CCTGAGGGGC TCTACGATAT GGCGGGCAAC
GTGTGGGAGT GGATGGAGGA TATATATAAA AAAGAGGAAA ACTGGAAAGC ATTAAGGGGT
GGTGATTATA GTGATAAAGC TGATGCTCTG CGCTGCTCCT CCCGGAACGG CAGCGATCCG
AGGGGCTGGT ACCTCGACCT TGTGGGTTTT CGAGTGATTC GTTCCAGTCA TTCTTCCTCT
TCCTGA
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| Protein sequence | MQPDTRNATP EFSPDELLIF IGHSDDASAE ADAMLELKEE IEHDFRRLLT SNNHRSRFRR
IKFWEWRYDA LAIPGGQDVV VAPALERAQI AVFLFKKRVG CVTRQELDIT RKQSRDTHVF
AFFPHNQPLV NSFDTLDDEI QATSDWLELK KYQKSLTSDW TQSGSSSVTP FPKYKDPKDL
QKIAADRLCT ALSVILSLES SIVRPTPLQQ VNSAAELLRC YHATLKQQLG NITLTGSPAL
EHFSVKLSET FVSLSLSAAS RCEVRSSAGG EGCDEAEYQH SSTPEKVMSF VFQHHPLLLV
IGDPGSGKTT LLKYYALSCL DNGRHKEFGF NEPVHVFFLP LRELKQDEHG AYASLPANLA
VWSSKQFLKI EESLFSGWLE RPSTLMLLDG LDEISDVHDR IAVCKWIDRT VGRFTNAKFV
VTSRSTGYRK GDGIEIESSH LRADIMDFSK EQQREFLHRW FRAAFLGELP PAVEDDTVWR
GQQEQKAATK ADAILLFLGQ EKNRSLRPLA GVPLLLQIMA MLWKDRQYLP GSRLKLYDAA
LNYMLDYRDR RRGIDSLLVA EDARRVLSPV SLWMQETLKI DEVDRAEMQQ QMQVQLDTLS
NSRPASDFCQ SLVDRAGVLV EYGEKEYLFR HKSFREYLAG VQLVKNIHKP NALDKLVSHF
GDDWWTEVFR FIIGHVEDAE LFDSFMQKLF DSPVTENLTQ KQQDLLIALV EEAPQRKIDA
LRQKLLDPAT TQNRQRYLLE CLKTIAKPEA LSVVTEFKQL GLSKEERVIV AVTLDKLGAE
YILIKGGTFI YSQTQKPETV QEMYVAKYTV TNQHYRRFID YLDAKEPEFA ERVSVETYRK
SLHELASGIE GFSEWLKKEP SLVSRFCSRY DEDKRFNKDE QPVVGVSWYA AKAWCLWLSL
LEGESARYQL PDEVQWEWAA GGQRDKPDKV LKVRDYPWPE EKGKPDKSRA NYNNHEGGTI
PVGRYPEGAT PEGLYDMAGN VWEWMEDIYK KEENWKALRG GDYSDKADAL RCSSRNGSDP
RGWYLDLVGF RVIRSSHSSS S
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