| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1553 |
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| Symbol | |
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| ID | 6463381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1640685 |
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| End bp | 1643756 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642727779 |
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| Product | putative signal transduction protein with Nacht domain |
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| Protein accession | YP_002018419 |
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| Protein GI | 194336625 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5635] Predicted NTPase (NACHT family) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0972336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGAC GAACAGATGA TAAACAAAGT CGAATTGTAC ATGTTCTTGT CGCATCTCCC
TCTGACGTTG CTGCAGAGCG GAAAATAGCC GATGAGGTAA TCCGTACCTG GCATATCCGT
CATCAGTTGT CTGGACTGAG GCTGGAACCG GTGTTGTGGG AATCACACGG TGCTCCTGAA
TGCGGTGACA GGGTGCAGGG AATTCTCAAT AAACAGATTG TTGACGAGTG TGATTGTGCC
ATCGGTATTT TCTGGACACG GATTGGTACT GATACCGGTG TGGCTCCGGG AGGAGCTGTT
GAAGAGGTAC AGCGGTTGAT GAGCAAGGGT AAGCCGGTCA TGCTCTATTT TTCCAAAGCC
AACTACCCAT TGAATCTTTC GGATTCCGGC AAGGTAATGG AGTTCGCCGG TCAGTTGACG
AGACTTGCTG AATTTAAAGC TTCCCTGCAA GGGTATTCGC TGTTGTGGGA ATATGACAGT
CAGGATAGAT TTCGTCAAAA CCTTCTGACT CATCTCGACA TCCAGATACC CAAGTGGTTT
GGGCCTGAAG CCACAGCTCA AGAGCGCGTT GTTGTTTCGC CGAAGCTCGA TGCTGCTTCG
GCCCTCAAAC GTTACCACTC AACCCTGGCG AGACAATTGG GCAACATCAC CCTGACAGGC
TCTCCCGTCA TTACAAATTT TTCAGCAAAG CTCTCCGACA CTTTTGTTTC TTTATCTCTT
TCTGGCACAT CGCGTTGCGA AACACGCATC CATGCCGCAG ACGAACCGTG TGTGTCGCAA
ACTGAGGAGC GTACGAGCAC TCCTGAAGAG GTTATGCGTT TTGTTTTCCA AAATTACCCG
TTACTGCTCG TTATCGGCGA TCCTGGTTCA GGAAAAACAA CCCTGCTGAA ATACTATGCG
CTCTCCTGTC TCGACAACGG GCGCTGTACT CAGTTTGGGT TCAGCGAAGA CGTCAATGTT
TTTTACTTTC CGCTGCGTGA ACTCAAGAAG GGTGATAGCG GCTATGCCTC ACTGCCTGCA
ATTCTCTCTG GATGGTGTGA AAAAAATTAT CTCACTCTTC CGGATACACT TTTTTCTGGC
TGGCTTGAGG AGCCGTCATC TCTTGTGCTT CTCGATGGTC TGGATGAAAT CAGTGATGTT
GACGAGCGGA TTGCTGTCTG TAGCTGGGTT GACAGGATGG TTGAGAGGTT TACCTCTGCC
CGCTTTGTGG TGACTTCACG GAGCACCGGG TACCGGAAAG GAGATGGCAT TGAGCTTGAA
GCGAGCCATC TGCGTGCCGA CATTATGGAT TTTTCCAAAG AGCAGCAGGC GGAGTTTTTA
CAGCGCTGGT TCAAGGCCGC ATTTCTGGGC GAAATTCCAC CAAGCGTTGG AGATAAGGGG
AGATGGCGAA TTCTTCAGGA ACAGAAAGCA GACCAAAAAG CCGATGCGAT TATTGCTTTT
CTGTCACAGG ATAAAAACAG GAGTTTACGT GCACTGGCAG GGGTTCCTCT GCTGTTACAG
ATTATGGCTA TGCTCTGGAA AGATCGGGAG TATCTGCCTG GAAGTCGTTT GAAGCTCTAC
GATGCGGCGT TGAACTACAT GCTTGATTAT CGCGACCGTC GCAGGGGAAT TGACCCGCTG
CTTGCGGCAG AAGATGCTCG TCGGGTGCTG AGCCCGGTCT CTCTCTGGAT GCAGGATGAG
CTGAAAAAAG ATGAGGCTGA CCGGGATAAA ATGCAGGATA AAATGCAGGA GCTGCTCGAT
ACGCTCTGCA ATTCGCTGCC AGCATCGGAG TTCTGCCGGA ATCTTGTTGA CCGGGCTGGT
CTTCTGGTTG AGTACGGTGA AAAAGAGTAT GTTTTCCGGC ACAAGTCATT CCGTGAGTAT
ATGGCGGGCG TTCAACTGCT CAAAAACATG CATCGGATGG GTTATCTCGA CATCATCGTT
ACCCGGTTCG GGGACGATTG GTGGCAGGAG CCGCTTCGCT TTTTTATCGG TCATGTTGAT
GATGCCGATG TGTTTGATTC CTTCATGCAG AAGCTTTTTG ATTCACCGGT CACTGAAAAC
TTGACACAAA AGCAGCAGGA CTTGCTTGTT GCTCTTGTTG AGGAGGCGCC GCAACGGAAG
ATTGATGCCT TGCGCCAAAA ACTGCTTGAT CCGGCGACCA CGCAAAACCG GCAGCGCTAT
TTGCTTGAGT GCCTGAAAAC TATCGCAAAA CCGGAAGCGC TTGCCGTTGT GAGGGAGTTC
AAGCAGTTGG GGTTGTCGAA AGAGGAACGG GTTATTGTTG CTGTAACACT CGACAAGCTT
GGTGCAGAGT ACATCCTGAT CAAAGGCGGA ACATTTATCT ATTCTCGGAC GAAGAAGCCG
GAAACCGTGC CTGATATGTA CGTTGCAAAA TACACGGTGA CCAACCAGCA CTACCGCCGC
TTTATCGACT ATCTCGATGC AAAGGAGCCG GAATTTGCTG AAAGAGTGCC CGTTGAAACA
TACCGAAAGA GCTTGCAGGA GCTGGCATCG GGCATAAAAG GATTCAGCAA TTGGCTGAAA
GAAGAACCCT CTTTGGTCAG CCGCTTTCGC TCATTTTATG ATGATGACAA GCGATTCAAC
AAGGATGAAC AGCCGGTTGT CGGGGTGAGC TGGTTTGCCG CCAAAGCCTG GTGCCTCTGG
CTTTCGCTGC TTGAAGGGGA GAGGGCACGG TACCAGCTTC CGGATGAAGT GCAGTGGGAG
TGGGCCGCAG GAGGCCAGCG CGACAAGCGG GATGAAGTAT TAAAGGTTAG GGACTATCCC
TGGCCCGAAG AGAAGGGTAA GCCTGATAAA ACACGGGCTA ATTATAACAA TCACGAGGGG
GGAACGACAC CTGTAGGCCG TTATCCTGAG GGAGCAACGC CTGAGGGGCT CTACGATATG
GCGGGCAATG TGTGGGAGTG GACAGAGGAT TGGTATGATG AAGATAAAGA CAGGCGTTCG
TTACGCGGAG GGGATTATAG TGATAAAGCT GATGCTCTGC GCTGCTCCTC CCGGCTCGAC
CTCAATCCGA GGAACAGGGG CTACTTCATT GGTTTTCGAG TGATTCGTTC CAGTCATTCT
TCCTCTTCCT GA
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| Protein sequence | MNRRTDDKQS RIVHVLVASP SDVAAERKIA DEVIRTWHIR HQLSGLRLEP VLWESHGAPE
CGDRVQGILN KQIVDECDCA IGIFWTRIGT DTGVAPGGAV EEVQRLMSKG KPVMLYFSKA
NYPLNLSDSG KVMEFAGQLT RLAEFKASLQ GYSLLWEYDS QDRFRQNLLT HLDIQIPKWF
GPEATAQERV VVSPKLDAAS ALKRYHSTLA RQLGNITLTG SPVITNFSAK LSDTFVSLSL
SGTSRCETRI HAADEPCVSQ TEERTSTPEE VMRFVFQNYP LLLVIGDPGS GKTTLLKYYA
LSCLDNGRCT QFGFSEDVNV FYFPLRELKK GDSGYASLPA ILSGWCEKNY LTLPDTLFSG
WLEEPSSLVL LDGLDEISDV DERIAVCSWV DRMVERFTSA RFVVTSRSTG YRKGDGIELE
ASHLRADIMD FSKEQQAEFL QRWFKAAFLG EIPPSVGDKG RWRILQEQKA DQKADAIIAF
LSQDKNRSLR ALAGVPLLLQ IMAMLWKDRE YLPGSRLKLY DAALNYMLDY RDRRRGIDPL
LAAEDARRVL SPVSLWMQDE LKKDEADRDK MQDKMQELLD TLCNSLPASE FCRNLVDRAG
LLVEYGEKEY VFRHKSFREY MAGVQLLKNM HRMGYLDIIV TRFGDDWWQE PLRFFIGHVD
DADVFDSFMQ KLFDSPVTEN LTQKQQDLLV ALVEEAPQRK IDALRQKLLD PATTQNRQRY
LLECLKTIAK PEALAVVREF KQLGLSKEER VIVAVTLDKL GAEYILIKGG TFIYSRTKKP
ETVPDMYVAK YTVTNQHYRR FIDYLDAKEP EFAERVPVET YRKSLQELAS GIKGFSNWLK
EEPSLVSRFR SFYDDDKRFN KDEQPVVGVS WFAAKAWCLW LSLLEGERAR YQLPDEVQWE
WAAGGQRDKR DEVLKVRDYP WPEEKGKPDK TRANYNNHEG GTTPVGRYPE GATPEGLYDM
AGNVWEWTED WYDEDKDRRS LRGGDYSDKA DALRCSSRLD LNPRNRGYFI GFRVIRSSHS
SSS
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