| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1551 |
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| Symbol | |
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| ID | 6463388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1638528 |
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| End bp | 1639727 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727777 |
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| Product | leucine-rich repeat protein |
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| Protein accession | YP_002018417 |
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| Protein GI | 194336623 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.823905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGCAAA ATACCTACAA TCAATGCCCT GTCTGTGGCT ATCCCCTCAC CATGCAAAGT
GCGGTATGCG CTCGGTGCGG TAATGACATT CTTGAAGATA TCTCCTCCCT TGACCAGCAA
TCCCAGGAAT TTCACCATCA AAACATTGAG GAAAAAAAAG CTGCGTGGTA TACCCGCTGC
CTAACCGAAA AGCTCAATGT CAGCACCAAC GATCCAGCCT CATGCGGCGC AAAATCTCAT
CAGGAAAGCG CACGACAGAG CTTCACCCGA ACGGATGAAA TTGCCTACCT TGACAGCATC
TCCAGAGCCG AACTCCTGAA AGAGTCTAAC GCACGAAAAA AATGGTGGAA CGCCCTCACC
GCTGACTGGA AGGAGATTGT CAAAACAACC CTGAAAGTTG TTCGTGATCC CTCCGACCAG
GAGCTGCTTG ACTTCCTTGA AACAACCCAC CTCCGTTGCG ATAATCGTCG AATCCATAAT
CTCCTGCCTC TTCGCGTCCT TGAACATCTC CAACAGCTCC GCTGCGACGA GTCACCCGTC
GAAAATCTCG ACCCGCTTCA GCACCTCGAA AAACTGCGGC GCCTCTACGC ATTCGACTGC
GACTTTTCAT CACTGGAACC CCTGCGTCAC CTTGCCGGGC TGAAGCTCCT CTGGATCTCA
AGCACCAAGA TCACCTCACT TGAACCCATC AGCAACCTGC TCAATCTTGA AGAGCTCTAC
TGTTCCGAAA CCGTCATCGA TGACCTCTCC CCGCTCAAAA AGCTCATCAA ACTCGAAAAA
CTCAGTTGCT ACAAAACAGA AATCTCCTCG CTTGAACCAC TCACAGATCT CGAAAATCTC
ATAGAACTCG GCATCGACAA CTCAAACGTC ATCGATATAA CGCCGCTCTC CAAACTCAGA
AGTCTTGAAT ACCTCCGCTG CAACAAAACC GGTATCAAGG ATATTGAAGC ACTCAGAGAG
CTTTCCGATC TTCGTGAACT GAGCCTTGCA AACACGCCGC TCAGCAATAT AGACCCCCTC
GAAGAGCTCG CCAACCTTGA AGAGCTTGAT CTGTCGAACA CCGCCATCAG CTCCATCGCC
CCCCTCATGC ATCTTCAGAA CCTCGAAAAG ATAGAACTTT CAGCAGGCAG GATTCCCCAG
GAAGAGCTTG AACGATTCAT TGAACTCCAC CCGGAGTGCG AAGTACTTTT GAAAGCATAG
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| Protein sequence | MEQNTYNQCP VCGYPLTMQS AVCARCGNDI LEDISSLDQQ SQEFHHQNIE EKKAAWYTRC
LTEKLNVSTN DPASCGAKSH QESARQSFTR TDEIAYLDSI SRAELLKESN ARKKWWNALT
ADWKEIVKTT LKVVRDPSDQ ELLDFLETTH LRCDNRRIHN LLPLRVLEHL QQLRCDESPV
ENLDPLQHLE KLRRLYAFDC DFSSLEPLRH LAGLKLLWIS STKITSLEPI SNLLNLEELY
CSETVIDDLS PLKKLIKLEK LSCYKTEISS LEPLTDLENL IELGIDNSNV IDITPLSKLR
SLEYLRCNKT GIKDIEALRE LSDLRELSLA NTPLSNIDPL EELANLEELD LSNTAISSIA
PLMHLQNLEK IELSAGRIPQ EELERFIELH PECEVLLKA
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