| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1547 |
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| Symbol | |
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| ID | 6463395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1630294 |
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| End bp | 1633863 |
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| Gene Length | 3570 bp |
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| Protein Length | 1189 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727773 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002018413 |
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| Protein GI | 194336619 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc)
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTA TACATTTACA TGCTCATACG CATTATTCGA TGCAGAGCAG TCCAATTTTT
CCGGATGAAA TTTTTTCTGC TGCGGTAAAG TTTGGCATGA AGAGTGTTGC GGTTACCGAT
TATTGCGCAA TGTTCAATAT GCCGGAGCTG TTCAGTGAGG CAAAAAGTGC CGGGATCAAG
CTCATTATCG GCAGCGAGTT GTTACTGCTT GAAACCGATG CTCACCAGCA TAGTCGTATT
CCTGTCTCTC CTTCGCTGGT GCTTCTGGTT CAGAATGATG CGGGATATCG CAATCTCTGT
ATTCTGCTTT CACGTGCGGC GAGGGAGGGG TTTGTTAATG GTATGCCGCA TATTGAAAGC
CGTCTGCTTG AAAGCTGTCA TGAGGGTCTG ATTGCTCTTT CTGCTTATTC TGCAGGAAGA
ATAGGTCGGG CGCTTCTTGC CGGGGCCACG GATGAAGCTG AAACGTTTGC GGCCTACTAT
AAACAGATTT TTGGGGATCG CTTCTATCTG GAATTGCAGC GCCATAATAC CCCTTTTGAT
GACAAGCTTA ATGAGCAGAC AATTGCCCTG GCGGAAAAAT TAGGGATTGA ACTTGTCGCT
ACCAACAATG TCCACTATCT CGAAAGAAAG GATGCTGACT GTTACCGGGC GATGGTTGCC
AACCGCACCA AGGAGAAGCT CTCGAACCAG AATCTCCAGG CTCTTGCAGG AAGCGACCAT
TATCTGAAAT CTTCCGGGGA GATGAGCGCT CTCTTCAGTG ATGCACATCG GGAGCTGAGT
AATACGGCGC TGATTGCCGG GAAATGTTCT TACAGTTTCA GTGACAAAGA GCCTATTTTG
CCCCATTTTC CTCTTCCTGA GGGGTTTGAG AGCGAGTTTG CCTATCTCCG TCATCTGACA
CTGGAGGGGG CAAAGGAGAA GTATGCTGAC GCGGATGCTG ATGGTATCAG CGCTGAGGAT
GTCCGCGCGA GAATCGAGCT TGAGCTTGGT GTGATCGAAA AGATGGGGTT CAGTTCCTAT
TTTCTTATTG TCAGTGATCT TATTGCGGCT TCCCGGCGTC TTGGCTACTC TGTAGGACCG
GGAAGGGGAT CGGCTGCCGG GAGCATTGTT GCCTATCTGA CTGGTATTAC ACGGATCGAC
CCGCTCAAAT ACAAGTTGCT GTTCGAGCGG TTTTTAAATC CCGAGCGTTC CTCAATGCCG
GATATCGATA TCGATTTTAC CCCTGTCGGC AAGCAGAAGG TGCTTGAGTA TACCGTTGAA
AAATATGGTA CGGAGAGTGT CGCAAAGGTT ATTGCGATTG GTACTTTTGC TGCCAAGGCG
GCTATCAGGG ATGCTGGAAG GGTGTTGGAG GTTCCGCTGC CCCTGGTCGA CAAACTGGCT
AAACTGGTGC CTGTCAAGCC GGGTATTACG CTTGAAAAGG CATTGAGTGA AGCGAAGGAG
ATGCAGCAGT TTGCCGAAAG CACGCCGGAA CTCCGAGAGT TGATCCGCTA TGCCCGTGCT
CTTGAAGGGA GGGCGCGGAA TGTTTCCATG CATGCGGGCG CTGTTGTGAT TACTGACGGG
CGGCTTGAGG AGCAGGTTCC GCTTTATGTT TCAAACAAGA TTGAAACTGA GGTGCGTAAA
TTTGCTGATG AGATTGATCT TGATGAACCC GATCATGTCA GGGGAAAGGC TTCTGACGGC
AGCGAGGAGA AGCAGGTTGT TACCCAGTTT GACAAGAACT GGATTGAAAC ATCCGGACTG
CTCAAGATTG ATTATCTCGG ACTTGAAACC CTGGCGGTTA TTGATGAAAC GCTCAAGATG
ATCAAGCGGC GCCACAACCT TGATATTGAG CTTGAAAAAG TTCCCATGAA CGATCGCAAA
ACGTTCAGGA TTTTTCAGGA GGGGAAGATG GCCGGTATTT TCCAGTTTGA GTCGTCGGGG
ATGCAGAGCT ATATGACACG CCTTCAGCCG ACACAGATTG GTGATATCAT CGCCATGAGC
GCACTCTATC GTCCGGGGGC CCTTAATGCA AGAATTGATG AGAAGCGGAA TGCTGTCGAT
CTTTTTGTTG ATCGCAAGCA TGGCCGTGAG GCGATTGATT ACATGCATCC CATGCTTGAG
ACGATTTTGA AAGAGACCTA CGGCGTTATT GTCTATCAGG AGCAGGTGAT GCAGATATCT
CAGGTTATGG GTGGTTTTTC TCTTGCAAAG GCGGATAATC TGCGCAAGGC GATGGGAAAA
AAGAAGCCTG AAATTATGGA GAAGTACAAG GCTGATTTTG TTCAGGGAGC CATCAAGCAG
GGGGTACACG ATACACTTGC CACAAGGGTT TTTGAACTTA TGGCTGAGTT TGCCGGTTAT
GGGTTCAATA AAAGCCATTC GGCGGCTTAC GGGGTGCTTG CATACTGGAC GGGGTATCTG
AAAGCTCATT ACACGATTGA GTTTGTGACG GCTGTCCTGA ACAGCGAAAT TGGTGATATT
GAGCGGATGA AACATTTGAC CGATGAGGCC AAAAGTTTCG GTATTTCGAC GCTGCCACCC
TCGATCAATA AAAGTGATGC GCTTTTTGCG GTTGAAGATG CTGGCGGACG TTCGTTTATC
CGTGTGGGGT TGAGCGCCAT CAAGCAGGTT GGTGCGGCTG CAAGGGCGGT TGTTACTTCA
AGGCTTCGCA GAAAGCGTGA TTTTGTGAAT TTGTTTGATC TGGCGGCATC GGTCGATTTG
AGGGTCATGA ATCGCAAGGC GCTGGAGTGT CTGATTCTTT CGGGGGCATT TGACGAGATC
GACCAGCATC GTGCCCGCCT TCTTGCCAAT GTTGACAAGG CGTTTAAATT CGGACAGATG
CAGAATCGCT CCGTGACGCT GGGGCAGTGT GGCTTTTTTA CTGCTGAGGA GGGGGCGGAG
CTTGAGGAGG CGCACTATCC TGACATGGAT GCAGCCGAGA TGATGCCCGA GGCTGAAAAG
CTGTTGCATG AAAAGAAACT GGTCGGTTTT TACCTGAGCC ATCATCCACT TTCACCCTAT
CGTCGTGACT GGCAGGCTTT TGCAACGCTG CAGCTTGATG CCAAGGAGGT TGTTGCGGCA
AAACAGTATA AGGTACTTGG TCTCATTGTA TCGGTGAAAC CCTATCAGGA CCGCAAAGGC
AAGCAGATGC TTTTTGGCAT TATTGAAGAT TTTACCGGCA AAGCGGATTT TACGGTCTTT
GCCAGTCTTT ATGAGCAGTA TGGCCATTTG ATAAAACCTG AAGAGGTCTT GATGCTCGTT
GCTGAAGGAG AGGTGAGTGG AGGTATGCTT AAATTGCTTG TCCGCGAGAT TATTCCGATC
AAGAAGGTAA GGAACGCTCT CGTTAAAAAA GTTGTCCTTA AAGTAGATGC TGATGATCAG
TTGCAGATGG AAAAACTTGG CAGGGTTAAA AAAATTTTTG ATGCGAACAA GGGTGGAACA
CCGGTCGAGT TTGAGGTAAA AGCGCAGTCT GGCGAAAATA TTGAGACGAT CAGTATTTTT
GCCCGGAGTA CTCCTATCGA TGCCGGGGAG AGCACTATTG AAAAGCTTGA GGAGGTTCTT
GGCCCCGATA ATGTGAGGAT TTCCGGGTAG
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| Protein sequence | MDFIHLHAHT HYSMQSSPIF PDEIFSAAVK FGMKSVAVTD YCAMFNMPEL FSEAKSAGIK
LIIGSELLLL ETDAHQHSRI PVSPSLVLLV QNDAGYRNLC ILLSRAAREG FVNGMPHIES
RLLESCHEGL IALSAYSAGR IGRALLAGAT DEAETFAAYY KQIFGDRFYL ELQRHNTPFD
DKLNEQTIAL AEKLGIELVA TNNVHYLERK DADCYRAMVA NRTKEKLSNQ NLQALAGSDH
YLKSSGEMSA LFSDAHRELS NTALIAGKCS YSFSDKEPIL PHFPLPEGFE SEFAYLRHLT
LEGAKEKYAD ADADGISAED VRARIELELG VIEKMGFSSY FLIVSDLIAA SRRLGYSVGP
GRGSAAGSIV AYLTGITRID PLKYKLLFER FLNPERSSMP DIDIDFTPVG KQKVLEYTVE
KYGTESVAKV IAIGTFAAKA AIRDAGRVLE VPLPLVDKLA KLVPVKPGIT LEKALSEAKE
MQQFAESTPE LRELIRYARA LEGRARNVSM HAGAVVITDG RLEEQVPLYV SNKIETEVRK
FADEIDLDEP DHVRGKASDG SEEKQVVTQF DKNWIETSGL LKIDYLGLET LAVIDETLKM
IKRRHNLDIE LEKVPMNDRK TFRIFQEGKM AGIFQFESSG MQSYMTRLQP TQIGDIIAMS
ALYRPGALNA RIDEKRNAVD LFVDRKHGRE AIDYMHPMLE TILKETYGVI VYQEQVMQIS
QVMGGFSLAK ADNLRKAMGK KKPEIMEKYK ADFVQGAIKQ GVHDTLATRV FELMAEFAGY
GFNKSHSAAY GVLAYWTGYL KAHYTIEFVT AVLNSEIGDI ERMKHLTDEA KSFGISTLPP
SINKSDALFA VEDAGGRSFI RVGLSAIKQV GAAARAVVTS RLRRKRDFVN LFDLAASVDL
RVMNRKALEC LILSGAFDEI DQHRARLLAN VDKAFKFGQM QNRSVTLGQC GFFTAEEGAE
LEEAHYPDMD AAEMMPEAEK LLHEKKLVGF YLSHHPLSPY RRDWQAFATL QLDAKEVVAA
KQYKVLGLIV SVKPYQDRKG KQMLFGIIED FTGKADFTVF ASLYEQYGHL IKPEEVLMLV
AEGEVSGGML KLLVREIIPI KKVRNALVKK VVLKVDADDQ LQMEKLGRVK KIFDANKGGT
PVEFEVKAQS GENIETISIF ARSTPIDAGE STIEKLEEVL GPDNVRISG
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