Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1543 |
Symbol | |
ID | 6463407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1624846 |
End bp | 1627518 |
Gene Length | 2673 bp |
Protein Length | 890 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642727769 |
Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
Protein accession | YP_002018409 |
Protein GI | 194336615 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase [TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.260017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAATT CTGTATGGCA TATGTTGAGG GTTGAAGAGC TGTTTGAGAA GCTGCATTCG ACGCCTGGTG GTCTCAGTGT CGGCGAAGCT GCTTCCCGGC TTGCACGTTA TGGGCCTAAC CGGATTCAGG CTGAGCGCAG GGCCAGTCCC TGGAAGCTGC TGCTGGAGCA GTTTAAAAAT GTACTTATCA TCACACTTCT TATTGCTACG GCTCTTTCGG CTTTTCTTGG TCATGGGGTT GAGGCAATTG CTATTTCAGT TATTGTTTTG TTTGCCGTGC TGCTTGGTTT TGTTCAGGAG TTCAGGGCTG AACGGGCTAT TGAGGCTCTC AGGGAAATGG CGGCTCCACT TGCAAAAGTA AGGCGTGAGG GTGAAGAGGT TTTGATCAAT GCTTCGGAGC TTGTTCCTGG TGATGTGGTG ATGCTTGCTG CTGGTGATCG TGTTCCTGCT GATGCAAGGC TGTTGCAGAC CAATAATCTG CGAGCTGATG AAGCCTCACT GACAGGTGAG TCGTTACCCT CGGAAAAAGA GGTTGCTGCG TTGCTGCACG AAAATGCCGG CCCTGGTGAT CGTAAAAACA TGGTTTTTGC TGGTACTTCT GTCAGCTATG GTCGTGCTGT GGCAATGGTG GTTGCGACCG GTATGCAGAC GGAGTTTGGC CGGATTGCCA CTATGCTGCA GAGTGTTGAA ACTGAAAAAA CACCTCTTCA GAAAAATCTC GACAAGGTCG GATCGATCCT TGCTCGTGCC GCTTTTGTGA TTGTGCTGGT TATTGTTGCT TTCGGAGTTT TCCGTGGCCA GCCATTTATT GAGATGCTTA TTTTTGGAAT TGCGCTGGCT GTGGCGGTGG TTCCTGAAGC TCTTCCTGCG GTGGTGACCA TTTCGCTTGC TCTTGGTGTG CAGCGCATGG TTAAGCGTCA TGCCCTCATG AGGCGCTTGC CGGTTGTTGA AACCCTTGGC AGCACGACCG TTATCTGTTC TGATAAAACG GGTACGCTTA CCCGTGACGA AATGACCGTG CGTGCGCTCT ATACCTCTGC TGTTCTGGTT GAGGTGAGCG GTTCAGGCTA TAGTCCTGAA GGCTCCTTTA CTGTTCCGGG TGGGGGTGAT TTGCCGGAAA GTATGCAGGA ATTGCTTTTG GCCGGTATTT TGTGTAATGA TGCCCGGTTG GTGAAGAACG ATGATGGTGG CTGGAAGATA GCCGGTGATC CGACGGAGGG GGCGCTGCTT GTTGTTGCCC GTAAGGCTGG TTTTGACGAG GGTGAGCTGC AATTGGCCAA TGAGCGTCTT GATGAGCAGC CCTTCTCTTC TGAGACGAAA CGGATGATTA CCCTGCACCG GAGTGATGAG GGAATGAAGG CGGTCATCAA GGGTGCACCT GAAGTGTTGC TTGCTCACTG TAGTTCTGTC CGTATCGCTG GTGGTGTTCA GTTGCTTGAT GATGCGATGC GAGAGGCTCT GCTTGCGGAG GCAGATGCTC TCGGAAAAAG GGCGCTGCGG GTGCTTGCTT TTGCTGTCAA TCAGGTTTCG GAGGTTCGGG GGGCTGACGA AGGGATGACC TTTCTTGGGT TTGCAGGTAT GATTGATCCG CCGAGGGCTG AAGCTGGAGA GGCGGTGCGT CAGTGCCTTG AAGCTGGCAT TCGTCCGGTT ATGATTACCG GAGATCATCC TTTGACGGCT GAAGCCATTG CCCGCGAGCT TGGGATTTTA CGGGATGGAA GGGTGGTGAC AGGCGTAACA CTGCAGGCTA TGAGTGAGGA AGAGCTTGGT CGTTCTATCG GTACCATTTC GGTTTTTGCG AGAGTAGCTC CGGAGCACAA GCTTCGTATT GTTGACGCGC TGCAGAAAAA CGGTGAAGTT GTCGCCATGA CGGGTGACGG GGTGAATGAT GCTCCAGCCC TCAAGAAAGC CGATATTGGC ATCTCGATGG GTATAACAGG CACCGATGTC TCAAAAGAGG CTTCAGCAAT GATGCTGACC GACGATAATT TTGCCTCGAT TGTGGCTGCA GTGGAGGAGG GACGGGGTAT CTATGACAAT ATTAAAAAAT ATCTCACTTA TCTGCTTTCC TCGAATATTG GCGAACTTGG CCTGATGGTT GGAGCAACAC TCATGGGTAT TCCCCTGCCT CTTTCTGCAG TACAGATTCT CTATGTGAAC CTCGCTACCG ATGGTCTTCC GGCTCTTGCG CTGGCTGTAG ATCCGGCGGA ACGTGATATT ATGCTGCGCC AGCCGAATGA TCCCAAAAAA GGGATTTTTA CGCCTGCCAT ACTGGCCCTT ATGCTCACTG GCGGGATTTG GTCGACGATT GTCAATCTTT CGCTTTTTCA GTTTGCCATT GCTTCAGGGC GTTCACTGAA AGAGGCCATG ACGATGACTT TTGTGTCGCT TGTTCTCATC CAGTTTTTCA AGGCTTATAA TTTCCGTTCT GAACGGGCCT CCATTCTTAA GCGTCCTTTT GCCAATAAAT GGCTGAACCT TGCCATTGTC TGGGAGCTGG TAATGCTTGC TGCCCTTATT ACCATTCCCG TTTTTCGTAC TCCGTTTGGA ACGTTCCTCC TGACGGCGGA AGACTGGGCC ATTGTGATTG GTGCTGCCGC TTCGGTTGTG CCTGTTATTG AGTTGCTTAA ATGGTTTCTG CGCAGAGGTT TTCTCGGGAA CGGTCAGCAA TGA
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Protein sequence | MMNSVWHMLR VEELFEKLHS TPGGLSVGEA ASRLARYGPN RIQAERRASP WKLLLEQFKN VLIITLLIAT ALSAFLGHGV EAIAISVIVL FAVLLGFVQE FRAERAIEAL REMAAPLAKV RREGEEVLIN ASELVPGDVV MLAAGDRVPA DARLLQTNNL RADEASLTGE SLPSEKEVAA LLHENAGPGD RKNMVFAGTS VSYGRAVAMV VATGMQTEFG RIATMLQSVE TEKTPLQKNL DKVGSILARA AFVIVLVIVA FGVFRGQPFI EMLIFGIALA VAVVPEALPA VVTISLALGV QRMVKRHALM RRLPVVETLG STTVICSDKT GTLTRDEMTV RALYTSAVLV EVSGSGYSPE GSFTVPGGGD LPESMQELLL AGILCNDARL VKNDDGGWKI AGDPTEGALL VVARKAGFDE GELQLANERL DEQPFSSETK RMITLHRSDE GMKAVIKGAP EVLLAHCSSV RIAGGVQLLD DAMREALLAE ADALGKRALR VLAFAVNQVS EVRGADEGMT FLGFAGMIDP PRAEAGEAVR QCLEAGIRPV MITGDHPLTA EAIARELGIL RDGRVVTGVT LQAMSEEELG RSIGTISVFA RVAPEHKLRI VDALQKNGEV VAMTGDGVND APALKKADIG ISMGITGTDV SKEASAMMLT DDNFASIVAA VEEGRGIYDN IKKYLTYLLS SNIGELGLMV GATLMGIPLP LSAVQILYVN LATDGLPALA LAVDPAERDI MLRQPNDPKK GIFTPAILAL MLTGGIWSTI VNLSLFQFAI ASGRSLKEAM TMTFVSLVLI QFFKAYNFRS ERASILKRPF ANKWLNLAIV WELVMLAALI TIPVFRTPFG TFLLTAEDWA IVIGAAASVV PVIELLKWFL RRGFLGNGQQ
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