Gene Ppha_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1543 
Symbol 
ID6463407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1624846 
End bp1627518 
Gene Length2673 bp 
Protein Length890 aa 
Translation table11 
GC content51% 
IMG OID642727769 
ProductATPase, P-type (transporting), HAD superfamily, subfamily IC 
Protein accessionYP_002018409 
Protein GI194336615 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0474] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.260017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATT CTGTATGGCA TATGTTGAGG GTTGAAGAGC TGTTTGAGAA GCTGCATTCG 
ACGCCTGGTG GTCTCAGTGT CGGCGAAGCT GCTTCCCGGC TTGCACGTTA TGGGCCTAAC
CGGATTCAGG CTGAGCGCAG GGCCAGTCCC TGGAAGCTGC TGCTGGAGCA GTTTAAAAAT
GTACTTATCA TCACACTTCT TATTGCTACG GCTCTTTCGG CTTTTCTTGG TCATGGGGTT
GAGGCAATTG CTATTTCAGT TATTGTTTTG TTTGCCGTGC TGCTTGGTTT TGTTCAGGAG
TTCAGGGCTG AACGGGCTAT TGAGGCTCTC AGGGAAATGG CGGCTCCACT TGCAAAAGTA
AGGCGTGAGG GTGAAGAGGT TTTGATCAAT GCTTCGGAGC TTGTTCCTGG TGATGTGGTG
ATGCTTGCTG CTGGTGATCG TGTTCCTGCT GATGCAAGGC TGTTGCAGAC CAATAATCTG
CGAGCTGATG AAGCCTCACT GACAGGTGAG TCGTTACCCT CGGAAAAAGA GGTTGCTGCG
TTGCTGCACG AAAATGCCGG CCCTGGTGAT CGTAAAAACA TGGTTTTTGC TGGTACTTCT
GTCAGCTATG GTCGTGCTGT GGCAATGGTG GTTGCGACCG GTATGCAGAC GGAGTTTGGC
CGGATTGCCA CTATGCTGCA GAGTGTTGAA ACTGAAAAAA CACCTCTTCA GAAAAATCTC
GACAAGGTCG GATCGATCCT TGCTCGTGCC GCTTTTGTGA TTGTGCTGGT TATTGTTGCT
TTCGGAGTTT TCCGTGGCCA GCCATTTATT GAGATGCTTA TTTTTGGAAT TGCGCTGGCT
GTGGCGGTGG TTCCTGAAGC TCTTCCTGCG GTGGTGACCA TTTCGCTTGC TCTTGGTGTG
CAGCGCATGG TTAAGCGTCA TGCCCTCATG AGGCGCTTGC CGGTTGTTGA AACCCTTGGC
AGCACGACCG TTATCTGTTC TGATAAAACG GGTACGCTTA CCCGTGACGA AATGACCGTG
CGTGCGCTCT ATACCTCTGC TGTTCTGGTT GAGGTGAGCG GTTCAGGCTA TAGTCCTGAA
GGCTCCTTTA CTGTTCCGGG TGGGGGTGAT TTGCCGGAAA GTATGCAGGA ATTGCTTTTG
GCCGGTATTT TGTGTAATGA TGCCCGGTTG GTGAAGAACG ATGATGGTGG CTGGAAGATA
GCCGGTGATC CGACGGAGGG GGCGCTGCTT GTTGTTGCCC GTAAGGCTGG TTTTGACGAG
GGTGAGCTGC AATTGGCCAA TGAGCGTCTT GATGAGCAGC CCTTCTCTTC TGAGACGAAA
CGGATGATTA CCCTGCACCG GAGTGATGAG GGAATGAAGG CGGTCATCAA GGGTGCACCT
GAAGTGTTGC TTGCTCACTG TAGTTCTGTC CGTATCGCTG GTGGTGTTCA GTTGCTTGAT
GATGCGATGC GAGAGGCTCT GCTTGCGGAG GCAGATGCTC TCGGAAAAAG GGCGCTGCGG
GTGCTTGCTT TTGCTGTCAA TCAGGTTTCG GAGGTTCGGG GGGCTGACGA AGGGATGACC
TTTCTTGGGT TTGCAGGTAT GATTGATCCG CCGAGGGCTG AAGCTGGAGA GGCGGTGCGT
CAGTGCCTTG AAGCTGGCAT TCGTCCGGTT ATGATTACCG GAGATCATCC TTTGACGGCT
GAAGCCATTG CCCGCGAGCT TGGGATTTTA CGGGATGGAA GGGTGGTGAC AGGCGTAACA
CTGCAGGCTA TGAGTGAGGA AGAGCTTGGT CGTTCTATCG GTACCATTTC GGTTTTTGCG
AGAGTAGCTC CGGAGCACAA GCTTCGTATT GTTGACGCGC TGCAGAAAAA CGGTGAAGTT
GTCGCCATGA CGGGTGACGG GGTGAATGAT GCTCCAGCCC TCAAGAAAGC CGATATTGGC
ATCTCGATGG GTATAACAGG CACCGATGTC TCAAAAGAGG CTTCAGCAAT GATGCTGACC
GACGATAATT TTGCCTCGAT TGTGGCTGCA GTGGAGGAGG GACGGGGTAT CTATGACAAT
ATTAAAAAAT ATCTCACTTA TCTGCTTTCC TCGAATATTG GCGAACTTGG CCTGATGGTT
GGAGCAACAC TCATGGGTAT TCCCCTGCCT CTTTCTGCAG TACAGATTCT CTATGTGAAC
CTCGCTACCG ATGGTCTTCC GGCTCTTGCG CTGGCTGTAG ATCCGGCGGA ACGTGATATT
ATGCTGCGCC AGCCGAATGA TCCCAAAAAA GGGATTTTTA CGCCTGCCAT ACTGGCCCTT
ATGCTCACTG GCGGGATTTG GTCGACGATT GTCAATCTTT CGCTTTTTCA GTTTGCCATT
GCTTCAGGGC GTTCACTGAA AGAGGCCATG ACGATGACTT TTGTGTCGCT TGTTCTCATC
CAGTTTTTCA AGGCTTATAA TTTCCGTTCT GAACGGGCCT CCATTCTTAA GCGTCCTTTT
GCCAATAAAT GGCTGAACCT TGCCATTGTC TGGGAGCTGG TAATGCTTGC TGCCCTTATT
ACCATTCCCG TTTTTCGTAC TCCGTTTGGA ACGTTCCTCC TGACGGCGGA AGACTGGGCC
ATTGTGATTG GTGCTGCCGC TTCGGTTGTG CCTGTTATTG AGTTGCTTAA ATGGTTTCTG
CGCAGAGGTT TTCTCGGGAA CGGTCAGCAA TGA
 
Protein sequence
MMNSVWHMLR VEELFEKLHS TPGGLSVGEA ASRLARYGPN RIQAERRASP WKLLLEQFKN 
VLIITLLIAT ALSAFLGHGV EAIAISVIVL FAVLLGFVQE FRAERAIEAL REMAAPLAKV
RREGEEVLIN ASELVPGDVV MLAAGDRVPA DARLLQTNNL RADEASLTGE SLPSEKEVAA
LLHENAGPGD RKNMVFAGTS VSYGRAVAMV VATGMQTEFG RIATMLQSVE TEKTPLQKNL
DKVGSILARA AFVIVLVIVA FGVFRGQPFI EMLIFGIALA VAVVPEALPA VVTISLALGV
QRMVKRHALM RRLPVVETLG STTVICSDKT GTLTRDEMTV RALYTSAVLV EVSGSGYSPE
GSFTVPGGGD LPESMQELLL AGILCNDARL VKNDDGGWKI AGDPTEGALL VVARKAGFDE
GELQLANERL DEQPFSSETK RMITLHRSDE GMKAVIKGAP EVLLAHCSSV RIAGGVQLLD
DAMREALLAE ADALGKRALR VLAFAVNQVS EVRGADEGMT FLGFAGMIDP PRAEAGEAVR
QCLEAGIRPV MITGDHPLTA EAIARELGIL RDGRVVTGVT LQAMSEEELG RSIGTISVFA
RVAPEHKLRI VDALQKNGEV VAMTGDGVND APALKKADIG ISMGITGTDV SKEASAMMLT
DDNFASIVAA VEEGRGIYDN IKKYLTYLLS SNIGELGLMV GATLMGIPLP LSAVQILYVN
LATDGLPALA LAVDPAERDI MLRQPNDPKK GIFTPAILAL MLTGGIWSTI VNLSLFQFAI
ASGRSLKEAM TMTFVSLVLI QFFKAYNFRS ERASILKRPF ANKWLNLAIV WELVMLAALI
TIPVFRTPFG TFLLTAEDWA IVIGAAASVV PVIELLKWFL RRGFLGNGQQ