Gene Ppha_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1528 
Symbol 
ID6463449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp1612329 
End bp1613291 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content51% 
IMG OID642727754 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_002018394 
Protein GI194336600 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGA AGGGAGAAAC CCAGGCGATT GTCCTGCAGA AAGCCAACAA GCTTAAATTG 
CAACGTGCTG CATATCATGC CAGTGAACCC GGCGATGTTC TGGTAAAAAC CATTGCGAGC 
ACCATCACGC CGGGATTTGA CCGGCTTCTT CTGACCAACA AGGCGGTATC AAGCCGGGTT 
TTCAAATATC CCATCATGCC TGGCAGTGAA GCTATCGGCC AGATTCTCAC AATCGGCCCA 
AGCGTAACAG AGCTGCAGCC CGGCGATTTT GTCTATGCCT TCAAGGGAGA TCGCTGGAGT 
GGAATCGAAC CCTATGGAGG CTGCCATGCG GAGACCATCC CCACATCTCA CGAGAACCTC 
TTTGCCCTTG GCCGCCCTCC CATCCACAGG GATCTGCTTA TCGGCCTTCT TGCCTATGCC 
GTCAGCGCCG TGGAAAAGGT ACCTCTTGAT GCTTCGTCAA GGATTCTTGT ACTTGGTCTC 
GGCTCGGTCG GACTCATGGT TGCCGAATAC CTGCAATCTC TCGGCTATAA ACACATCGAT 
GCCGTTGAAA CCTTCAGCAT CAGGGGACAA CTCTCCCATG CTGAACATAT CGCTCTCGAT 
ATCGACGATT TTACCCAGGA TTTCAACAAC AGCTACGATC TTATTATCGA AACCACCGGA 
AGGATTCTTC TTGTGGAAAA AGCTGCCCGG CTGATGAAAG CACAGGCAAT TGTCCTGCTG 
ATGGGCAACT ATGAGGTTAT GGCCTATGAC TACAGACTGA TACAGCATAA GGAGCCCGTC 
ATCATCTGCT CCGGCATTAC CACCGGTTCT CACCTGAAGG AGGCTTTTGC TGTACTTGAA 
AGCGGAAGAA TTGAGACTGA AAAATTTTTC ACCAATGTCT TCCCCGTCGC ACAGTACGAA 
CTGGCCTATC GCAAAGCGCT TGACAGCAAA GATTCCATCA AGACCGTGTT GAGCTGGCTC 
TAA
 
Protein sequence
MTMKGETQAI VLQKANKLKL QRAAYHASEP GDVLVKTIAS TITPGFDRLL LTNKAVSSRV 
FKYPIMPGSE AIGQILTIGP SVTELQPGDF VYAFKGDRWS GIEPYGGCHA ETIPTSHENL 
FALGRPPIHR DLLIGLLAYA VSAVEKVPLD ASSRILVLGL GSVGLMVAEY LQSLGYKHID 
AVETFSIRGQ LSHAEHIALD IDDFTQDFNN SYDLIIETTG RILLVEKAAR LMKAQAIVLL 
MGNYEVMAYD YRLIQHKEPV IICSGITTGS HLKEAFAVLE SGRIETEKFF TNVFPVAQYE 
LAYRKALDSK DSIKTVLSWL