| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1523 |
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| Symbol | truA |
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| ID | 6463457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1606058 |
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| End bp | 1606789 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727749 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_002018389 |
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| Protein GI | 194336595 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000575068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAACA TAAGGGTTAC TGTTGAATAT GACGGAACCT CGTTTGCCGG CTGGCAGCGG
CAGTCGGGTG CTATTGTTAC CGTTCAGGGG GAGATTGAAG TCGCACTTGG TAAAATTTTG
CAGGAAAAGA TCTCTCTTGC TGCAGCAGGG AGAACGGATA AGGGGGTTCA CGCCAGGGCT
CAGACGGCAA ACTTTTTTAC AGCATCATCT CTGGAGCCAT CCCGGATTGT GCATTCACTG
AACTCGCTTC TGCCTCAAAC AATCAGGATA AGCAATCCCG AAGAGGTTGA TGCTGATTTT
CATGCAAGGC ATAGTGCCAA AGAAAGGCAA TACCGCTATT TCCTTATCGA GGAGCCTTCG
GCGATTTATG GGCGGTTTGC GGGCTGTTCG TTCGGTAAGC TTGATGTAGC GATTATGCAG
CAAATGGCAG CCATCCTGGT CGGTACTCAT GATTTCTCGG CTTTTTCAAA GGAAGACAGA
GATAACCCGG GTCGGATATG TAGCGTAACG GCTTGCAAAT GGTACCCCTG CAAACATTAC
CTTGTTCTAC GGATTTCAGC GGATCGCTTT TTGCGAAGTA TGGTGCGCTA TCTGGTGGAT
GCCATGATAC GTGCAGGAAA GGGGAGGCTT TCGGTTGGGG ACTTCTGTCG GATGCTTGAA
ACCGGGGTCA CGACCAGTCA GCTTAATCCA GCATTGCCGG CAGGTCTTTT TCTCTGGGAC
GTACTCTACT GA
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| Protein sequence | MKNIRVTVEY DGTSFAGWQR QSGAIVTVQG EIEVALGKIL QEKISLAAAG RTDKGVHARA
QTANFFTASS LEPSRIVHSL NSLLPQTIRI SNPEEVDADF HARHSAKERQ YRYFLIEEPS
AIYGRFAGCS FGKLDVAIMQ QMAAILVGTH DFSAFSKEDR DNPGRICSVT ACKWYPCKHY
LVLRISADRF LRSMVRYLVD AMIRAGKGRL SVGDFCRMLE TGVTTSQLNP ALPAGLFLWD
VLY
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