Gene Ppha_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1517 
Symbol 
ID6463470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp1597859 
End bp1598521 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content47% 
IMG OID642727743 
Producthypothetical protein 
Protein accessionYP_002018383 
Protein GI194336589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.167395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG CAGTAAAATT ATTAAGCCTC GCAGTAGCAC TTTTTGCTGG ACTCGGCAAT 
ACCGCCCAGG CAGCAGGATT TAAAATCGGC GCAGACGTCG TCAGCAGTTA CGTCTTTAGA 
GGTACCGAAT TTGGTAATTC AGTAGCCATT CAGCCAGCCC TTTCCTACAC CTGCCCGACA 
ACCGGTATTA TTGTTGGCGC ATGGGGTTCC TATGCTGTCA GTGAAGATGC GGGCAACAGA 
CACAAGGAGA TTGATCTTTA TGCAACGCTG CCGGTAGGTC CACTCAGCTT CACTGTAACC 
GATTATAATT CACCTGATGG CGGCGATTCA TTTGATTTCA GTGATGATGG TTCCAACGTG 
GTTGAACTCA GCGTTGGCTA TACAAAAGAC AATCTCAGCC TTCTGGCCGC AATCAACGTC 
GCTGGACTTG ATACCGATAA TGCAAAATAC TGCGAAGCCG GCTACAAGTT CTACGACAAG 
GATGGCTATA CGGCAAAAGG CGTTGTGGGA TTAGGTGATG AAGATTTCTA TGGCGATGGT 
GATGGAGACA ATATCGCTCT TGTCAACACC GGTATATCGG TTTCCAAAGA CCGCTTCACT 
GCATCGTACA TCTACAACCC TGACACCGCT AAATCAAACC TTGTCTTTAT GGCATCGTTC 
TGA
 
Protein sequence
MKKAVKLLSL AVALFAGLGN TAQAAGFKIG ADVVSSYVFR GTEFGNSVAI QPALSYTCPT 
TGIIVGAWGS YAVSEDAGNR HKEIDLYATL PVGPLSFTVT DYNSPDGGDS FDFSDDGSNV 
VELSVGYTKD NLSLLAAINV AGLDTDNAKY CEAGYKFYDK DGYTAKGVVG LGDEDFYGDG 
DGDNIALVNT GISVSKDRFT ASYIYNPDTA KSNLVFMASF