Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1492 |
Symbol | rpsP |
ID | 6463503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1571981 |
End bp | 1572391 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642727719 |
Product | 30S ribosomal protein S16 |
Protein accession | YP_002018359 |
Protein GI | 194336565 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0228] Ribosomal protein S16 |
TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000990353 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTAAAGA TTAGACTGAA AAGAGCAGGA AGAAAAAAAT TGCCGGTATA CCAAATTGTC GTGGCCGATG CGCGCTCTCC AAGGGACGGC AAATTCCTTG AAGTTGTTGG CACTTATCAG CCAACAGCAA AACCTCATGC TGTCACTATT AAAAAAGATC GTATCGTTTA CTGGATGCAG ACTGGCGCAC AGCCGACAGC AACAGTGAAC AGCCTTATCC GCACCACCGG ACTGCTGTAT GAACTCAGGC TTAAAAGCAT GGGTCGCAGC GAGGCTGAAA TTTCAGCAGA GATGGAAAAA TGGCAGGAGC ACCAGGCTGT AAGACGTCAG AAGAGGCTTG CATTGAAATC ACATCGTCGC AGCGCCAAGA AAGAGGCTGA AGCAAAAGCT GCCACCGGTG GAGAGGCCTG A
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Protein sequence | MVKIRLKRAG RKKLPVYQIV VADARSPRDG KFLEVVGTYQ PTAKPHAVTI KKDRIVYWMQ TGAQPTATVN SLIRTTGLLY ELRLKSMGRS EAEISAEMEK WQEHQAVRRQ KRLALKSHRR SAKKEAEAKA ATGGEA
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