Gene Ppha_1492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1492 
SymbolrpsP 
ID6463503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1571981 
End bp1572391 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content49% 
IMG OID642727719 
Product30S ribosomal protein S16 
Protein accessionYP_002018359 
Protein GI194336565 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000990353 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTAAAGA TTAGACTGAA AAGAGCAGGA AGAAAAAAAT TGCCGGTATA CCAAATTGTC 
GTGGCCGATG CGCGCTCTCC AAGGGACGGC AAATTCCTTG AAGTTGTTGG CACTTATCAG
CCAACAGCAA AACCTCATGC TGTCACTATT AAAAAAGATC GTATCGTTTA CTGGATGCAG
ACTGGCGCAC AGCCGACAGC AACAGTGAAC AGCCTTATCC GCACCACCGG ACTGCTGTAT
GAACTCAGGC TTAAAAGCAT GGGTCGCAGC GAGGCTGAAA TTTCAGCAGA GATGGAAAAA
TGGCAGGAGC ACCAGGCTGT AAGACGTCAG AAGAGGCTTG CATTGAAATC ACATCGTCGC
AGCGCCAAGA AAGAGGCTGA AGCAAAAGCT GCCACCGGTG GAGAGGCCTG A
 
Protein sequence
MVKIRLKRAG RKKLPVYQIV VADARSPRDG KFLEVVGTYQ PTAKPHAVTI KKDRIVYWMQ 
TGAQPTATVN SLIRTTGLLY ELRLKSMGRS EAEISAEMEK WQEHQAVRRQ KRLALKSHRR
SAKKEAEAKA ATGGEA