| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1490 |
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| Symbol | trmD |
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| ID | 6463505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1570706 |
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| End bp | 1571452 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642727717 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_002018357 |
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| Protein GI | 194336563 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.383633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTGTGC CTGAAACCCC TTCTCAGCTC AGGAATGCCA TAAGGATTGA TGTTATTTCT
GTCATTCCCG GCTTTTTTGA TTCACCGCTT GATAATGGAT TGTTGAGCAT TGCGCGCAGA
AAAGAGCTCG CGGACATATA TGTGCATAAC CTGCATGACT ATGGATTGGG CAGGTACAGG
CAGGTGGATG ATTCACCTTT TGGAGGTGGT GCTGGCATGG TGATTCGTCC GGAGCCAGTG
TTTGCCTGTA TAGAGGCACT CAAGGCCGAA AGAGAATATG ATGAAGTGAT TTTTCTTTCC
CCGGACGGGG AACTGTTTGA GCAGTCTATG GCAAACAGAT TTTCAAGGAT GCACAACCTT
ATTATTCTCT GTGGTCATTA CAAGGCCGTT GATGAAAGAA TTCGCCAGAA ATTGATTACC
ATGGAAATTT CCATTGGTGA TGTTGTGGTT TCAGGCGGGG AGATACCGGC ACTCTTTTTG
ATGGATGCGC TCGTGAGGGT TATTCCAGGT GTTCTTGGTG ACAGTGAGTC GGCACTGACC
GACTCTTTTC AGACGGAACT CCTTGATTGT ACCTACTATA CTCGTCCGGC AGAATTCAGA
GGGATGAAGG TGCCTGAAGT GCTGTTGACG GGTCATCACA GCAATATCGA GCAGTGGCGC
AGTGAAAATG CTCTTGAGCG AACACGCAAG CGTCGGCCCG ATCTTCTCGA TAAAGAGTGT
TTAGAATTAA AGAACAAAAT AACGTAA
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| Protein sequence | MVVPETPSQL RNAIRIDVIS VIPGFFDSPL DNGLLSIARR KELADIYVHN LHDYGLGRYR
QVDDSPFGGG AGMVIRPEPV FACIEALKAE REYDEVIFLS PDGELFEQSM ANRFSRMHNL
IILCGHYKAV DERIRQKLIT MEISIGDVVV SGGEIPALFL MDALVRVIPG VLGDSESALT
DSFQTELLDC TYYTRPAEFR GMKVPEVLLT GHHSNIEQWR SENALERTRK RRPDLLDKEC
LELKNKIT
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