| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1487 |
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| Symbol | |
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| ID | 6463508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1567349 |
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| End bp | 1569181 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642727714 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_002018354 |
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| Protein GI | 194336560 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACTTA TCAATCCTGG CTTCCAGACA CTGCCCGAGC TTTTCACTTC GGTTTTTAAC
CATTACCGGG GACAAAGTTC AAAATTCCCG TTCGCAAGGA AAATCAATGG TGTATATGAA
CCCATCTCAT ATAGTGCTTT TGAAAAAGAT GTCAACTCAT TTGCTGCGTT TCTGAAACAG
AACGGCATCA AGGCAAAAGA GCGGGTCGCC ATTCTTTCAG AAAACAGGCC TGGATGGTAC
CTGTCTGATA TGGCTATCCT GAACATCGGG GCAATCAATG TGCCGCTCTA CCCCTCCCTG
CCAGCCAATC AGATTGAATA CATCCTTAGT AACTGCAGCG CGAAGGGCAT TATTGTCTCA
AACATGCTTC AGCTCGGCAA AATCCTTTCG ATTTGGCAAA ATCTTCCGGA ATTGACTCTT
GTGGTGGTTA TGAACCGCCT CGAAGAGACC ATCGAAGATG TTCTCGATCT GAATCAGGCC
AAAGCAAGGG GTGAAAAAAT TCTTGCAGAA AAACCCTGGT GCCTTGAGGG CGTACCTGTC
GAACCTGACG ATGTTGCAAC GATCATCTAT ACATCAGGTA CAACAGGGCT TCCGAAAGGA
GTCATGCTTA CGCATCGTAA CATTTGTGAA AACGTCAAGT CCTGCTCCTC CATCATGCGT
CTTGATGAAT CCGACTGCAG CCTCTCTTTC CTGCCACTCT CCCATGCCTA TGAACGAACC
GGGGGTTATT ACCTGATTTT TTCCTGCGGA GCAGCTATTT ACCTGGCTGA GAGTATTGAA
ACGATTTCAC TGAACATGAG TGAAGCCCGT CCGACCATCA TCTTTACCGT TCCGAGACTG
TTCGACCGCA TCAAGATGGG CATACTCAAA CAGATTTCCT CTCAAAGTGC CATAAAGCAG
AAAATATTCT ATTGGGCGCT GAAAACGGGG GAAAAGTACC ACCAGGAAAT CAATGAAAAA
GGAGTTGCCG GAAAACTGCT TTCCGCGAAG CACGCCTTAG CAGAAAAACT GGTCTATAAA
AAAATCAAAA ATAAGTTTGG CGGAAGGTTG CGTTATTTTG TCTCCGGGGG AGCTGCCCTC
CCTCAAAAGA TCGGTGAATT TTTTCAGGCA CTTGATATCA GTATTCTGGA AGGATTTGGC
CTTACGGAGA CCTCTCCGGT AACCCATGTC AATCGCCCGG AAAAAATCAA GTATGGCACG
GTAGGCCCGG CAGTTGAAAA CGTTCAGGTT ATGATTGCCG AGGATGGCGA AATTCTGCTC
AAAGGCCCAA ATATCATGAA AGGATACTGG AATGATGAGG CTGCCACCCG GGAGGTTATC
AGAGATGGCT GGTTCCATAC AGGCGACATC GGAGTGATCG ACCGTGACGG TTATCTGAAA
ATAACCGATC GTAAAAAGCA TATCATCGTC ACCTCTGGCG GCAAAAATAT TGCCCCCATG
CCTATCGAAA ATCTTATTTC CGATAGCTCT TACGTTGATC AGGTTATTGT GATTGGCGAA
AAAAGGCCAT TTCTCATAGC CCTTATTGTT CCCGAATTCA ATAAACTGAA GGAGTTTGCT
GCCGCAGAGG GAATTCAGGC TGCGAGTAAC AAAGAGTTGA TTGAAAACAA GAGTGTTCAG
CAAATTTTTG AAAAATTGCT CCGCACGGTT TCACGACAGC TTGCCACTCA TGAAAAGGTA
CGCAAGTTCC TGCTTGTGGA AACCGCATTC ACCATTGAGA GCGGTCATAT GACTCCGACG
ATGAAACTCA AGCGCAAGGA GATCAGTGCA AGGTACGCCT CTGAAATAGA CAAGGTTTAC
AATGCGCTCA ATATGGTCTA CAACTCAGAA TAG
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| Protein sequence | MGLINPGFQT LPELFTSVFN HYRGQSSKFP FARKINGVYE PISYSAFEKD VNSFAAFLKQ
NGIKAKERVA ILSENRPGWY LSDMAILNIG AINVPLYPSL PANQIEYILS NCSAKGIIVS
NMLQLGKILS IWQNLPELTL VVVMNRLEET IEDVLDLNQA KARGEKILAE KPWCLEGVPV
EPDDVATIIY TSGTTGLPKG VMLTHRNICE NVKSCSSIMR LDESDCSLSF LPLSHAYERT
GGYYLIFSCG AAIYLAESIE TISLNMSEAR PTIIFTVPRL FDRIKMGILK QISSQSAIKQ
KIFYWALKTG EKYHQEINEK GVAGKLLSAK HALAEKLVYK KIKNKFGGRL RYFVSGGAAL
PQKIGEFFQA LDISILEGFG LTETSPVTHV NRPEKIKYGT VGPAVENVQV MIAEDGEILL
KGPNIMKGYW NDEAATREVI RDGWFHTGDI GVIDRDGYLK ITDRKKHIIV TSGGKNIAPM
PIENLISDSS YVDQVIVIGE KRPFLIALIV PEFNKLKEFA AAEGIQAASN KELIENKSVQ
QIFEKLLRTV SRQLATHEKV RKFLLVETAF TIESGHMTPT MKLKRKEISA RYASEIDKVY
NALNMVYNSE
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