Gene Ppha_1482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1482 
Symbol 
ID6463515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1562065 
End bp1563222 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content51% 
IMG OID642727709 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_002018349 
Protein GI194336555 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.639387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGCG CAGAATTAAT CGGTCGTGAA GAACTGGCTG AAATACAGGA GCTATTCAGC 
AGGGAAAAGG TCAATTTATA CCGTTACGGC GGGGGGAATT ACAAAACAAG GGAGTTCGAA
GAGAAATTTG CCGCATGGAT TGGGGTGAAG TATGCCCATG CAGTTTCTTC GGGCACGGCT
GCTATCCATT GTGCTCTTGC CGGTGCAGGT ATTGCTCCCG GTGATGAGGT CATCACAACG
GCATGGACCT TTATTGCCCC TGTGGAGGCC ATCAGTGCGC TTGGAGCGGT TCCTGTGCCG
GTTGAGCTTG ATGAAACCTA CCATCTCGAC CCGCTGGAAG TTGAAAAGGC TATTACTCCT
GCGACAAAAG CGGTGGTGGC CATTCCCATG TGGGCTTCGC CAAAAATGGA TGAACTTTCG
GCTCTCTGCC GGGAACGCGG TCTAATTTTG ATTGAGGATG CAGCGCAGGC ACTTGGAGCT
TCATATAAAG GGCAGAAGCT TGGTACCATT GGCAGTGTTG CCTCGTTCTC GTTTGATGCA
GGCAAAACGC TTCATACCGG TGAGGGTGGA ATCATTGTGA CCAATGACAA GGAGATCTAT
GACCGTGCTG CCGAATTCTC TGATCATGGC CATATGCACT TGCCAGGGTT ACCACGAGGC
AAAGATCCGA GGCGTTCAAA AGGGCTTAAT TTGCGTCTCA GCGAAGTGAC TGCAGCCATC
GGTCTGGCCC AGCTCGCCAA AATTGATACG ATTCTGTCGA TGTCAAGAGA GAACAAGAAG
AAAATCAAGG AGGCTATCCG TCATCTTGAT AACATTATTC TCAGGCCATT CAGTGATGAA
GCTGGCTCAC AGGGAGATAC CCTGATTTTC AGGGTCAGGG ATCGCGAAGC CGCCTTGCAG
TTTGAAGCGC ATCTGACCGA GCATGGTTTC GGTACCAAAA TTCTGCCGGA AGCCCTCGAC
TGGCACTATG CAGGAGTGTG GGGACACCTT CTTGGAGAGT ATGACCGGTA TCGTGGTCTC
GATCTTGAAG CACTCTGGCC AAAAACCGGC ATTATGCTGC GCAGCAGTAT TTGTCTGAAC
ATTCCCGTGC TGATGGACGG GGAAACGATT GAGAGAGTGA TCAACGCTAT AGTTTCCGGT
GCGGAAAAGA TAGGGTAG
 
Protein sequence
MAGAELIGRE ELAEIQELFS REKVNLYRYG GGNYKTREFE EKFAAWIGVK YAHAVSSGTA 
AIHCALAGAG IAPGDEVITT AWTFIAPVEA ISALGAVPVP VELDETYHLD PLEVEKAITP
ATKAVVAIPM WASPKMDELS ALCRERGLIL IEDAAQALGA SYKGQKLGTI GSVASFSFDA
GKTLHTGEGG IIVTNDKEIY DRAAEFSDHG HMHLPGLPRG KDPRRSKGLN LRLSEVTAAI
GLAQLAKIDT ILSMSRENKK KIKEAIRHLD NIILRPFSDE AGSQGDTLIF RVRDREAALQ
FEAHLTEHGF GTKILPEALD WHYAGVWGHL LGEYDRYRGL DLEALWPKTG IMLRSSICLN
IPVLMDGETI ERVINAIVSG AEKIG