Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1482 |
Symbol | |
ID | 6463515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1562065 |
End bp | 1563222 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642727709 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_002018349 |
Protein GI | 194336555 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.639387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGCG CAGAATTAAT CGGTCGTGAA GAACTGGCTG AAATACAGGA GCTATTCAGC AGGGAAAAGG TCAATTTATA CCGTTACGGC GGGGGGAATT ACAAAACAAG GGAGTTCGAA GAGAAATTTG CCGCATGGAT TGGGGTGAAG TATGCCCATG CAGTTTCTTC GGGCACGGCT GCTATCCATT GTGCTCTTGC CGGTGCAGGT ATTGCTCCCG GTGATGAGGT CATCACAACG GCATGGACCT TTATTGCCCC TGTGGAGGCC ATCAGTGCGC TTGGAGCGGT TCCTGTGCCG GTTGAGCTTG ATGAAACCTA CCATCTCGAC CCGCTGGAAG TTGAAAAGGC TATTACTCCT GCGACAAAAG CGGTGGTGGC CATTCCCATG TGGGCTTCGC CAAAAATGGA TGAACTTTCG GCTCTCTGCC GGGAACGCGG TCTAATTTTG ATTGAGGATG CAGCGCAGGC ACTTGGAGCT TCATATAAAG GGCAGAAGCT TGGTACCATT GGCAGTGTTG CCTCGTTCTC GTTTGATGCA GGCAAAACGC TTCATACCGG TGAGGGTGGA ATCATTGTGA CCAATGACAA GGAGATCTAT GACCGTGCTG CCGAATTCTC TGATCATGGC CATATGCACT TGCCAGGGTT ACCACGAGGC AAAGATCCGA GGCGTTCAAA AGGGCTTAAT TTGCGTCTCA GCGAAGTGAC TGCAGCCATC GGTCTGGCCC AGCTCGCCAA AATTGATACG ATTCTGTCGA TGTCAAGAGA GAACAAGAAG AAAATCAAGG AGGCTATCCG TCATCTTGAT AACATTATTC TCAGGCCATT CAGTGATGAA GCTGGCTCAC AGGGAGATAC CCTGATTTTC AGGGTCAGGG ATCGCGAAGC CGCCTTGCAG TTTGAAGCGC ATCTGACCGA GCATGGTTTC GGTACCAAAA TTCTGCCGGA AGCCCTCGAC TGGCACTATG CAGGAGTGTG GGGACACCTT CTTGGAGAGT ATGACCGGTA TCGTGGTCTC GATCTTGAAG CACTCTGGCC AAAAACCGGC ATTATGCTGC GCAGCAGTAT TTGTCTGAAC ATTCCCGTGC TGATGGACGG GGAAACGATT GAGAGAGTGA TCAACGCTAT AGTTTCCGGT GCGGAAAAGA TAGGGTAG
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Protein sequence | MAGAELIGRE ELAEIQELFS REKVNLYRYG GGNYKTREFE EKFAAWIGVK YAHAVSSGTA AIHCALAGAG IAPGDEVITT AWTFIAPVEA ISALGAVPVP VELDETYHLD PLEVEKAITP ATKAVVAIPM WASPKMDELS ALCRERGLIL IEDAAQALGA SYKGQKLGTI GSVASFSFDA GKTLHTGEGG IIVTNDKEIY DRAAEFSDHG HMHLPGLPRG KDPRRSKGLN LRLSEVTAAI GLAQLAKIDT ILSMSRENKK KIKEAIRHLD NIILRPFSDE AGSQGDTLIF RVRDREAALQ FEAHLTEHGF GTKILPEALD WHYAGVWGHL LGEYDRYRGL DLEALWPKTG IMLRSSICLN IPVLMDGETI ERVINAIVSG AEKIG
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