Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1473 |
Symbol | |
ID | 6463528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1556189 |
End bp | 1556617 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642727700 |
Product | protein tyrosine phosphatase |
Protein accession | YP_002018341 |
Protein GI | 194336547 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | [TIGR02691] arsenate reductase (thioredoxin) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT CAATCCTGAT CCTCTGTACC GGAAACTCCT GCCGCAGCCA GATGGCTGAA GGGTTTCTTC GTTCATTCGA TTCCTCACTT GAAGTTTATT CTGCAGGTAC GAAACCTGCA GCAATGGTTC ATCCCCTTGC GGTCAAAGTG ATGCGTGAAG AGTGGGTTGA CATCAGTACA AACCTCCCGA AAAGTGTCGA TACCTTTCTT GAAAAAGCTT TTGATTATGT GATCACCGTG TGCGACGGAG CCAACGACTC CTGTCCGGTG TTTATCGGCA AGGTGGAACA TCGGTTACAC ATTGGCTTTG ACGATCCGGC AGAGGCAGAA GGGACAAAAG AGGAGGTGCT TGCCACTTTC CGTCGTGTCC GAGACGAAAT AAACCAGCGT TTCAGACAAT TCTATAACGA AAATCTGAAA GGAAAATAA
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Protein sequence | MKKSILILCT GNSCRSQMAE GFLRSFDSSL EVYSAGTKPA AMVHPLAVKV MREEWVDIST NLPKSVDTFL EKAFDYVITV CDGANDSCPV FIGKVEHRLH IGFDDPAEAE GTKEEVLATF RRVRDEINQR FRQFYNENLK GK
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