Gene Ppha_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1473 
Symbol 
ID6463528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1556189 
End bp1556617 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content47% 
IMG OID642727700 
Productprotein tyrosine phosphatase 
Protein accessionYP_002018341 
Protein GI194336547 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID[TIGR02691] arsenate reductase (thioredoxin) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT CAATCCTGAT CCTCTGTACC GGAAACTCCT GCCGCAGCCA GATGGCTGAA 
GGGTTTCTTC GTTCATTCGA TTCCTCACTT GAAGTTTATT CTGCAGGTAC GAAACCTGCA
GCAATGGTTC ATCCCCTTGC GGTCAAAGTG ATGCGTGAAG AGTGGGTTGA CATCAGTACA
AACCTCCCGA AAAGTGTCGA TACCTTTCTT GAAAAAGCTT TTGATTATGT GATCACCGTG
TGCGACGGAG CCAACGACTC CTGTCCGGTG TTTATCGGCA AGGTGGAACA TCGGTTACAC
ATTGGCTTTG ACGATCCGGC AGAGGCAGAA GGGACAAAAG AGGAGGTGCT TGCCACTTTC
CGTCGTGTCC GAGACGAAAT AAACCAGCGT TTCAGACAAT TCTATAACGA AAATCTGAAA
GGAAAATAA
 
Protein sequence
MKKSILILCT GNSCRSQMAE GFLRSFDSSL EVYSAGTKPA AMVHPLAVKV MREEWVDIST 
NLPKSVDTFL EKAFDYVITV CDGANDSCPV FIGKVEHRLH IGFDDPAEAE GTKEEVLATF
RRVRDEINQR FRQFYNENLK GK