| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1470 |
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| Symbol | |
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| ID | 6463533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1548987 |
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| End bp | 1551248 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642727698 |
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| Product | peptidase C14 caspase catalytic subunit p20 |
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| Protein accession | YP_002018339 |
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| Protein GI | 194336545 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAGTC GCAAAGCATT TCTCATTGGA GCAGAAGAGT ATGGTGAGGG ATTTGTTTCT
TTGCCTGCTG TGCGCCAGGA TATCCAGCTT ATGAGTTCTT CGTTGGAGGC ATGCGGATAT
GAGGTGGAGA TTTGCCCTCC AGAAGTTTTG ACTAATGCCA GCGTGCTTGA CAGCGTAATT
CGCTCTTTCT GTTCAGACGG TGGATCTGAA GATATTCGTA TTCTTTACTT TACAGGCCAT
GGGTTGTTAT TGGATAACGT AGACTGTATT ATCCCTGCTG GGACATCACG GAAAGATGCT
TTAACCAGTC GTAATCAACG AGTTTCTACC GATCTAAGTC AAACGGTTGC AGACTCAAGT
ATTGGACTTG TTCTTTTTAT AATTGATGCA TGTCGTGACA AAGCAGATAT TCCGGTTACA
AAGGGCGGTG CAGAATGGGG GGATCAATCG CGGTTAATGA GGCCTGAAGA GGCTCGTTTT
ATTCGTTATT TTGGTTGTGC CTCCAATGAG ATATGCCAAG TACTTTTGAC CATTTCAGAA
GAGCAGGCTT CCAGTCTGTT TACGAAAGTA CTTGTGGATT GTCTCGATAA TGGTAATTGC
TTCTCATTGA TTCAGTTCAT GTATTGTGTT GAGAAGTTTT GCTTAAAAGT CCTTAGTGAA
CACTCCTATC TTCAAAATCA AAAACCGCGA TTAAGTTATG GTGAACTTTC GGCAGAAAAA
CAAGATGTAC TAAAAAGACC CATATTCGGG ACAGATGGTA ATGTAAGGTG TTTTTCGGTA
TGGCCGTTGT TTGATCCCAA TAAGCTACAT TGTCTCGTTG TGATTTCCGA GACAGACCCT
CAATTTTCAC CTGACTGGGG CTTGAAAGAA CTTGTTGATG AAGCACTTGT GGGATCTACA
GGCGAAAGAA TCTGGGACGC CTTCATTCTT GCTTTCAATC ATCAAAAGCT TGTTTCTGGT
CAAGAACGTA TATTACCGAA TACATTTGAG TCATCTGTAG TTTCTTTTGG TGTTTTTTCT
GTGACCAATG CTTACACAAA TCATGAACGG TTAGATCAGG CAATACGTGC TGTAGTTGAA
GCTGATCTCG TGATTTTCGA TGTAACCGGT TTCGAACCAG GAGTTATGCT GCTCATCGGA
ATTCGATCCG CTTGTCGCAG GTCACTCAGT ATTTGCAGCT ATGGCGGGGG GTGGCATGAG
GGACAACCGC TTGAAATTCC TTTCAACCTA CAGGAACTCA ACATTAATTC ACATGCTCCT
GAAGAAACAT TGGTAGATGA GAATTCTGTC GTAGCACGAT TTGTCCGTCG AGTTGAGACC
GGATTCCATC AATTGTCGCG ACATCCTCGC TATCTTGATC TTCCTGCATT TGATGCATTG
AGAGATCTGG GTTCGGACTA TGACGCAAGC TCAATTATTG ATGTAAAAAA GCGTATTCTT
GTTCTTTGTT CATACTCTTT TAATCACTGC AGTAATTGGC AATATGTTAA AAGAAAAGTT
AAAACCGTCC TTTGGAATAA AAAGAGATAT AAACCTGAAA TTGAGAGAAT TATTGACTAT
GGCACCTCCC AGCTTATCTG GCAAAGTCTT TTTGAACAAA TTCGTCGGAC TACAGGATGT
GTAGTAGACT GGTCTGAATA CAATGCATCA GTGTTTCTGG AACTTGGAGT AAGGCTTGCT
GTCAGTGAAT GGGGTGCAGT ACACATCATT GATCGTCAAT GTCTCACAGG AGGGGAGAAA
ACACCTGAAC ATAAACTCGT TCAAACTGAT GATATTCATC GACTATTCAA TCCTATTACT
TATGAATGTC ATGACAACTC CTCAGCCCCC TTTGAAGAGG TAGTAGAAGC ACTGGTAGAG
CGCGATCCCC ATCTTGACGG TGATGTTGGC TACAATCGTA TTCACCGTGT GCTACTTGAC
GTTATAGGCA AAGTAAAGGA AGCAAGTCTG CCGCTTGCTG AAGATCTCAA GAGGAGGGCA
GATGCTCTCC ATAACACGCA GCAGGGGAAA GTTGCGACAC CCCAGATATT GTTTTCGGGT
AGTCGTGTTA ACAAAACGGA TAGTGAACGG GCTGCTCTGG AACTTCGCAT AGCAGCATGG
CTCTATTTGG AATATCGAGT AAAAGCACAA ACGACTCAGA ATGATGTAGA TATCTATCAT
GACTTGGGTC GTTCGGTGAA AGATGCTCTT TATGATCTTG GTGATAATAA TTCAGTTCAA
CTTGCCTTAT ATATTGAAGA CCAACTCAAT AAACTGGAAT GA
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| Protein sequence | MSSRKAFLIG AEEYGEGFVS LPAVRQDIQL MSSSLEACGY EVEICPPEVL TNASVLDSVI
RSFCSDGGSE DIRILYFTGH GLLLDNVDCI IPAGTSRKDA LTSRNQRVST DLSQTVADSS
IGLVLFIIDA CRDKADIPVT KGGAEWGDQS RLMRPEEARF IRYFGCASNE ICQVLLTISE
EQASSLFTKV LVDCLDNGNC FSLIQFMYCV EKFCLKVLSE HSYLQNQKPR LSYGELSAEK
QDVLKRPIFG TDGNVRCFSV WPLFDPNKLH CLVVISETDP QFSPDWGLKE LVDEALVGST
GERIWDAFIL AFNHQKLVSG QERILPNTFE SSVVSFGVFS VTNAYTNHER LDQAIRAVVE
ADLVIFDVTG FEPGVMLLIG IRSACRRSLS ICSYGGGWHE GQPLEIPFNL QELNINSHAP
EETLVDENSV VARFVRRVET GFHQLSRHPR YLDLPAFDAL RDLGSDYDAS SIIDVKKRIL
VLCSYSFNHC SNWQYVKRKV KTVLWNKKRY KPEIERIIDY GTSQLIWQSL FEQIRRTTGC
VVDWSEYNAS VFLELGVRLA VSEWGAVHII DRQCLTGGEK TPEHKLVQTD DIHRLFNPIT
YECHDNSSAP FEEVVEALVE RDPHLDGDVG YNRIHRVLLD VIGKVKEASL PLAEDLKRRA
DALHNTQQGK VATPQILFSG SRVNKTDSER AALELRIAAW LYLEYRVKAQ TTQNDVDIYH
DLGRSVKDAL YDLGDNNSVQ LALYIEDQLN KLE
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