Gene Ppha_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1459 
Symbol 
ID6463548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1532024 
End bp1535539 
Gene Length3516 bp 
Protein Length1171 aa 
Translation table11 
GC content54% 
IMG OID642727688 
ProductSMC domain protein 
Protein accessionYP_002018329 
Protein GI194336535 
COG category[S] Function unknown 
COG ID[COG4717] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA AACGGCTGGA GCTGAAAGCG TTTGGCCCGT TTTCCGGTCA GCTTCTTGAT 
TTCTCTTCTC CGCTTCCCGG CCTGCACATT GTGTATGGCC CCAATGAAGC CGGGAAAAGC
AGCGCCATGA GAGCGCTTCA AGCCCTCTTT TTTGGCTTTC CCTTGCGCAC CTCCGATAAT
TTTCTTCACC AGAACCAGCA ACTTCTGGTG GGTGGATGCC TGGAGGGAAG AGATGGCACG
GAACTTGCAT TTTTTCGCCG GAAACGAAGC GTGAAAGATC TCTTCGACCA GCACGACAAT
CCGATTGAGC CATCAGCCCT GACGCCCTGG CTGCATGGTA TTGAAAAAGA GCTTTTTCTT
GCGCTTTACG GTATTAACCA TGAGACGCTG GTTATGGGAG GGCAAGGCAT TCTTGACCAG
CAGGGAGAGG TGGGCAAGGC GCTCTTCGCT GCCGGGGCAG GGCTTGCCTC ACTGAAACCG
GTCATTGACG AGCTTGATCG GGAAGGGGAG AGCCTTTTCA GACCACAGGG TTCAAGCAGG
TTGATCAATG AGGCGCTGGC TTTTCACAAG GAGCTGCAGA GGCAATCGAA AGAGGTCACC
CTTTCGGGGC GTGAGTGGGA GGAGCATCGT CAGGCTCTTG ATGATGCAGT GAAGAGGCTG
ACGGAGCGGC AAAAGAGAAA GCAGGAACTG GAGACCGAAA AAAGAAGACT TGAGCGTTTG
CAACAGGCGC TGCCTGATCT TTCAGATCGT AAAAACCTGA TGCAGCAACT GGCTGAACTG
GGCGAGGTAA TCCCTCTTCC TCTGGACTTC AGCGAACGAC GTACAACCCT TGAACAGAGG
GAGAGAGAGG CCCGCATTCA CCATGAGCAG GTCATTGCAA GAGTTCAGGC GCTTCGTGAA
AAAATGGGCG GACTATCACT GAACCGGACT CTGCTCGATG AAGCTGTTGT GATTGATGAA
CTCTATCAGC GGCTTGGCGA GTACCGGAAA GCCAAAAGTG ACCGTCCGCA GCGCGAAGGG
CAGCGCATCA GCGCCCGAAC AGCGGCGGCA TCTCTTCTCC GGCAGATCAA ACCGGAATTA
ACCATCAATG AGGTTGAAAG TCTCCGTCCC GGTCTCTCGA AGCGCAGAAG AGTGCAGGAG
CTTGCTTCCC GCCATGAAGC GCTTCTCCAG GGAAACCGCA ATACCCGGCT TCAACTGCAG
GAGATTGAAA AGGCATTGGA GAGGGTGGAT GGTGAAAGAG GGCTGCTTCC ACCTTTTACT
GAAACAACTC AACTTTTGCG GGCACTTCTT GCTGCTGAAA GGGTCGGGGA TATCGATGCT
CAGATCATTG CTCTGGAGCA GGAGCAGCAG AGAGGCGAGC GTGAGTGCCA TGCGGCATTG
CACCGTCTCG CTCTCTGGAA TGGAGCACTG GAACAGGTGC TTCACCTGCC ACTTCCTTTG
GTGGAAACGG TAAACCTTTT TGATGAGGAG TTCCGTGCCT TGAGCGATCA TAAACGGCAG
CTTCTTGCAG AAAGGGAAGA GCTGGAAAAG CAGCAGATAG TGGCTGAAGA GGCGCTCCGT
GATCTTGAGT TTGCCTCTGA CGTTCCCGGT GAAGAGGAGC TGGCAAAGAA GAGAAGCCGA
CGGGAGCAGG GATGGCAACT TCTGCGTCGT CAATGGATCA ATCAGGAGGA TGTTGCTGAA
GAGAGCCGCA GTTATGACTC CCAACACCCG CTTCCGGAGG CCTACGAGAG GATGGTTGGC
CTGGCTGACC AGAGTGCCGA CCGCCTCTAT CGCGAAGCGG AGCTTGTTCA AAAACATGCA
ACACTGAAAG CTGAGGCGGA AAAGAGTACC AGGAAGCTGG TAGCGCTTCA TGAAAAAGAG
GCAGGTGCTG ATAATGCTCT TGCCGCATTT CAGCGCCGCT GGCAGGAACA ATGGGCATCA
TGCGGAATGA CACCCCTCTC TCCACGCGAG ATGAGCGCCT GGCTTGGCTC CTTTGAACAT
CTGCGCATCC AGGTGCGGGA GCATCAGAAG AGCCAGAGAG AGTTGGATGA AAAGGTGGAA
CGGAGAGGAG AGTTGCGGGG AGCCCTCCTG AAGGAACTTG CTGCTTCAGA TGATGTTAAA
AGATTCCCTG GAGAAGAGTT GCAGGAGCCA CTCGACTATA CCCGATCTCT TCTGAACACT
ATTGAAACGG TTCAGAAAAA GCGGGAGTTG CTGGACGGCA AACTTCGTGA TGGCCAAAAA
GCGCTGGAAA ATGCTGTAGA GAAGAGGAAT CGGGCTGAAG AGGAGCTGAA GGATTGGCAA
AGGGAGTGGA GTGATGCCCT TACCCCTCTC GGGCTTGATG GCAGGGCGCT CCCATCCGAA
GTGCTTGATT TTATTGAAAC GCTGCAGAGC TGTTTTGAAC GACTCAAGGA GGCTGATGAT
TTCCGCAAAC GGATAGAGGG TATTGACCGG GACACAACTG AATTCGAAAG GGATGTTGAA
CTGCTGGTGC AGAAGATTGC TCCTGATCTT GCAGGCATCG AATCCAACCC TGCCGTCACG
GAACTTAAAC TTCGTCTTGA TCGTGCCAGT CAGGAGCAGG CCGTGCTGAA TCGAGAAAGT
GAAGAGCTGG AGTTACTCGA AAAAGCCCTT GTCACAACGC AAACTGATCT GCGGAGTTGC
GAAGAGGAGC TTGCAGCAAT GCGTCACGCT GCTCGTTGCG AAACACGTGA GGAGTTGATT
GTGGCTGAAC AACGCTCCGC GACCTGGATA ATACTTTCAA ACCGGCAACA GGAGCTGGAA
CGGAATCTCT CCCGCATTGC CGGGGGCACA ACCCTTGCCG ATCTTGAGCT TCATGCCGAA
TCACTCAATC CTGATGAACT TCCCGGTCGT ATCGACTTGC TGAACAAAGA GATCGTCAGC
CTGCTCGATC CTGAAATCAA TCAGTTGGCG GAGAGCGTTG GCCGCAAAAA AAATGAGCTT
GAGCGAATGA ATGGCGGCAG TAAAGCGGCT GAGCTTGCCG AAGCCCTGCA ACACTCCCTG
ACAAAAATCC GTCGTCTGAC CGAACGCTAC ATCCGCATCA AGCTGGCCAC AAAAATGCTG
CGTGACGAGA CCGAGCGCTA TCGCCAGGAT AACGAGGCAC CCGTGCTGAA AATTGCCTCC
CGCTATTTCA CTGAGCTGAC CTTGGGCTCC TTTACCGGCC TGCGTACCGA CAGTGACGAC
CATGGCAAAC TGGTTCTGGC CGGTGTGCGG CCAAATGAAA GCTGGCTGCA GGTTGAAGCA
ATGAGTTCCG GCACCCGCGA CCAGCTCTAC CTTGCCCTGC GTCTTGCCAC CCTTGAATGG
CGGACAGAGT CAAGCGAACC CATGCCCTTT ATTGTTGACG ATATCCTCAT AAACTTCGAC
GACCGACGTT CACAGGCAAC CCTCAAAGCA CTCAGCGAAC TGGGCGAAAA AAGCCAGGTG
ATTCTTTTTA CGCATCACAG GAAGATCGTG GAAGCAGCAG GAGAGCCCAG GTTTGCAGGA
AAGATATTTA TCCATCAGCT TGGGGAGGAG TTATGA
 
Protein sequence
MKIKRLELKA FGPFSGQLLD FSSPLPGLHI VYGPNEAGKS SAMRALQALF FGFPLRTSDN 
FLHQNQQLLV GGCLEGRDGT ELAFFRRKRS VKDLFDQHDN PIEPSALTPW LHGIEKELFL
ALYGINHETL VMGGQGILDQ QGEVGKALFA AGAGLASLKP VIDELDREGE SLFRPQGSSR
LINEALAFHK ELQRQSKEVT LSGREWEEHR QALDDAVKRL TERQKRKQEL ETEKRRLERL
QQALPDLSDR KNLMQQLAEL GEVIPLPLDF SERRTTLEQR EREARIHHEQ VIARVQALRE
KMGGLSLNRT LLDEAVVIDE LYQRLGEYRK AKSDRPQREG QRISARTAAA SLLRQIKPEL
TINEVESLRP GLSKRRRVQE LASRHEALLQ GNRNTRLQLQ EIEKALERVD GERGLLPPFT
ETTQLLRALL AAERVGDIDA QIIALEQEQQ RGERECHAAL HRLALWNGAL EQVLHLPLPL
VETVNLFDEE FRALSDHKRQ LLAEREELEK QQIVAEEALR DLEFASDVPG EEELAKKRSR
REQGWQLLRR QWINQEDVAE ESRSYDSQHP LPEAYERMVG LADQSADRLY REAELVQKHA
TLKAEAEKST RKLVALHEKE AGADNALAAF QRRWQEQWAS CGMTPLSPRE MSAWLGSFEH
LRIQVREHQK SQRELDEKVE RRGELRGALL KELAASDDVK RFPGEELQEP LDYTRSLLNT
IETVQKKREL LDGKLRDGQK ALENAVEKRN RAEEELKDWQ REWSDALTPL GLDGRALPSE
VLDFIETLQS CFERLKEADD FRKRIEGIDR DTTEFERDVE LLVQKIAPDL AGIESNPAVT
ELKLRLDRAS QEQAVLNRES EELELLEKAL VTTQTDLRSC EEELAAMRHA ARCETREELI
VAEQRSATWI ILSNRQQELE RNLSRIAGGT TLADLELHAE SLNPDELPGR IDLLNKEIVS
LLDPEINQLA ESVGRKKNEL ERMNGGSKAA ELAEALQHSL TKIRRLTERY IRIKLATKML
RDETERYRQD NEAPVLKIAS RYFTELTLGS FTGLRTDSDD HGKLVLAGVR PNESWLQVEA
MSSGTRDQLY LALRLATLEW RTESSEPMPF IVDDILINFD DRRSQATLKA LSELGEKSQV
ILFTHHRKIV EAAGEPRFAG KIFIHQLGEE L