Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1459 |
Symbol | |
ID | 6463548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1532024 |
End bp | 1535539 |
Gene Length | 3516 bp |
Protein Length | 1171 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642727688 |
Product | SMC domain protein |
Protein accession | YP_002018329 |
Protein GI | 194336535 |
COG category | [S] Function unknown |
COG ID | [COG4717] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA AACGGCTGGA GCTGAAAGCG TTTGGCCCGT TTTCCGGTCA GCTTCTTGAT TTCTCTTCTC CGCTTCCCGG CCTGCACATT GTGTATGGCC CCAATGAAGC CGGGAAAAGC AGCGCCATGA GAGCGCTTCA AGCCCTCTTT TTTGGCTTTC CCTTGCGCAC CTCCGATAAT TTTCTTCACC AGAACCAGCA ACTTCTGGTG GGTGGATGCC TGGAGGGAAG AGATGGCACG GAACTTGCAT TTTTTCGCCG GAAACGAAGC GTGAAAGATC TCTTCGACCA GCACGACAAT CCGATTGAGC CATCAGCCCT GACGCCCTGG CTGCATGGTA TTGAAAAAGA GCTTTTTCTT GCGCTTTACG GTATTAACCA TGAGACGCTG GTTATGGGAG GGCAAGGCAT TCTTGACCAG CAGGGAGAGG TGGGCAAGGC GCTCTTCGCT GCCGGGGCAG GGCTTGCCTC ACTGAAACCG GTCATTGACG AGCTTGATCG GGAAGGGGAG AGCCTTTTCA GACCACAGGG TTCAAGCAGG TTGATCAATG AGGCGCTGGC TTTTCACAAG GAGCTGCAGA GGCAATCGAA AGAGGTCACC CTTTCGGGGC GTGAGTGGGA GGAGCATCGT CAGGCTCTTG ATGATGCAGT GAAGAGGCTG ACGGAGCGGC AAAAGAGAAA GCAGGAACTG GAGACCGAAA AAAGAAGACT TGAGCGTTTG CAACAGGCGC TGCCTGATCT TTCAGATCGT AAAAACCTGA TGCAGCAACT GGCTGAACTG GGCGAGGTAA TCCCTCTTCC TCTGGACTTC AGCGAACGAC GTACAACCCT TGAACAGAGG GAGAGAGAGG CCCGCATTCA CCATGAGCAG GTCATTGCAA GAGTTCAGGC GCTTCGTGAA AAAATGGGCG GACTATCACT GAACCGGACT CTGCTCGATG AAGCTGTTGT GATTGATGAA CTCTATCAGC GGCTTGGCGA GTACCGGAAA GCCAAAAGTG ACCGTCCGCA GCGCGAAGGG CAGCGCATCA GCGCCCGAAC AGCGGCGGCA TCTCTTCTCC GGCAGATCAA ACCGGAATTA ACCATCAATG AGGTTGAAAG TCTCCGTCCC GGTCTCTCGA AGCGCAGAAG AGTGCAGGAG CTTGCTTCCC GCCATGAAGC GCTTCTCCAG GGAAACCGCA ATACCCGGCT TCAACTGCAG GAGATTGAAA AGGCATTGGA GAGGGTGGAT GGTGAAAGAG GGCTGCTTCC ACCTTTTACT GAAACAACTC AACTTTTGCG GGCACTTCTT GCTGCTGAAA GGGTCGGGGA TATCGATGCT CAGATCATTG CTCTGGAGCA GGAGCAGCAG AGAGGCGAGC GTGAGTGCCA TGCGGCATTG CACCGTCTCG CTCTCTGGAA TGGAGCACTG GAACAGGTGC TTCACCTGCC ACTTCCTTTG GTGGAAACGG TAAACCTTTT TGATGAGGAG TTCCGTGCCT TGAGCGATCA TAAACGGCAG CTTCTTGCAG AAAGGGAAGA GCTGGAAAAG CAGCAGATAG TGGCTGAAGA GGCGCTCCGT GATCTTGAGT TTGCCTCTGA CGTTCCCGGT GAAGAGGAGC TGGCAAAGAA GAGAAGCCGA CGGGAGCAGG GATGGCAACT TCTGCGTCGT CAATGGATCA ATCAGGAGGA TGTTGCTGAA GAGAGCCGCA GTTATGACTC CCAACACCCG CTTCCGGAGG CCTACGAGAG GATGGTTGGC CTGGCTGACC AGAGTGCCGA CCGCCTCTAT CGCGAAGCGG AGCTTGTTCA AAAACATGCA ACACTGAAAG CTGAGGCGGA AAAGAGTACC AGGAAGCTGG TAGCGCTTCA TGAAAAAGAG GCAGGTGCTG ATAATGCTCT TGCCGCATTT CAGCGCCGCT GGCAGGAACA ATGGGCATCA TGCGGAATGA CACCCCTCTC TCCACGCGAG ATGAGCGCCT GGCTTGGCTC CTTTGAACAT CTGCGCATCC AGGTGCGGGA GCATCAGAAG AGCCAGAGAG AGTTGGATGA AAAGGTGGAA CGGAGAGGAG AGTTGCGGGG AGCCCTCCTG AAGGAACTTG CTGCTTCAGA TGATGTTAAA AGATTCCCTG GAGAAGAGTT GCAGGAGCCA CTCGACTATA CCCGATCTCT TCTGAACACT ATTGAAACGG TTCAGAAAAA GCGGGAGTTG CTGGACGGCA AACTTCGTGA TGGCCAAAAA GCGCTGGAAA ATGCTGTAGA GAAGAGGAAT CGGGCTGAAG AGGAGCTGAA GGATTGGCAA AGGGAGTGGA GTGATGCCCT TACCCCTCTC GGGCTTGATG GCAGGGCGCT CCCATCCGAA GTGCTTGATT TTATTGAAAC GCTGCAGAGC TGTTTTGAAC GACTCAAGGA GGCTGATGAT TTCCGCAAAC GGATAGAGGG TATTGACCGG GACACAACTG AATTCGAAAG GGATGTTGAA CTGCTGGTGC AGAAGATTGC TCCTGATCTT GCAGGCATCG AATCCAACCC TGCCGTCACG GAACTTAAAC TTCGTCTTGA TCGTGCCAGT CAGGAGCAGG CCGTGCTGAA TCGAGAAAGT GAAGAGCTGG AGTTACTCGA AAAAGCCCTT GTCACAACGC AAACTGATCT GCGGAGTTGC GAAGAGGAGC TTGCAGCAAT GCGTCACGCT GCTCGTTGCG AAACACGTGA GGAGTTGATT GTGGCTGAAC AACGCTCCGC GACCTGGATA ATACTTTCAA ACCGGCAACA GGAGCTGGAA CGGAATCTCT CCCGCATTGC CGGGGGCACA ACCCTTGCCG ATCTTGAGCT TCATGCCGAA TCACTCAATC CTGATGAACT TCCCGGTCGT ATCGACTTGC TGAACAAAGA GATCGTCAGC CTGCTCGATC CTGAAATCAA TCAGTTGGCG GAGAGCGTTG GCCGCAAAAA AAATGAGCTT GAGCGAATGA ATGGCGGCAG TAAAGCGGCT GAGCTTGCCG AAGCCCTGCA ACACTCCCTG ACAAAAATCC GTCGTCTGAC CGAACGCTAC ATCCGCATCA AGCTGGCCAC AAAAATGCTG CGTGACGAGA CCGAGCGCTA TCGCCAGGAT AACGAGGCAC CCGTGCTGAA AATTGCCTCC CGCTATTTCA CTGAGCTGAC CTTGGGCTCC TTTACCGGCC TGCGTACCGA CAGTGACGAC CATGGCAAAC TGGTTCTGGC CGGTGTGCGG CCAAATGAAA GCTGGCTGCA GGTTGAAGCA ATGAGTTCCG GCACCCGCGA CCAGCTCTAC CTTGCCCTGC GTCTTGCCAC CCTTGAATGG CGGACAGAGT CAAGCGAACC CATGCCCTTT ATTGTTGACG ATATCCTCAT AAACTTCGAC GACCGACGTT CACAGGCAAC CCTCAAAGCA CTCAGCGAAC TGGGCGAAAA AAGCCAGGTG ATTCTTTTTA CGCATCACAG GAAGATCGTG GAAGCAGCAG GAGAGCCCAG GTTTGCAGGA AAGATATTTA TCCATCAGCT TGGGGAGGAG TTATGA
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Protein sequence | MKIKRLELKA FGPFSGQLLD FSSPLPGLHI VYGPNEAGKS SAMRALQALF FGFPLRTSDN FLHQNQQLLV GGCLEGRDGT ELAFFRRKRS VKDLFDQHDN PIEPSALTPW LHGIEKELFL ALYGINHETL VMGGQGILDQ QGEVGKALFA AGAGLASLKP VIDELDREGE SLFRPQGSSR LINEALAFHK ELQRQSKEVT LSGREWEEHR QALDDAVKRL TERQKRKQEL ETEKRRLERL QQALPDLSDR KNLMQQLAEL GEVIPLPLDF SERRTTLEQR EREARIHHEQ VIARVQALRE KMGGLSLNRT LLDEAVVIDE LYQRLGEYRK AKSDRPQREG QRISARTAAA SLLRQIKPEL TINEVESLRP GLSKRRRVQE LASRHEALLQ GNRNTRLQLQ EIEKALERVD GERGLLPPFT ETTQLLRALL AAERVGDIDA QIIALEQEQQ RGERECHAAL HRLALWNGAL EQVLHLPLPL VETVNLFDEE FRALSDHKRQ LLAEREELEK QQIVAEEALR DLEFASDVPG EEELAKKRSR REQGWQLLRR QWINQEDVAE ESRSYDSQHP LPEAYERMVG LADQSADRLY REAELVQKHA TLKAEAEKST RKLVALHEKE AGADNALAAF QRRWQEQWAS CGMTPLSPRE MSAWLGSFEH LRIQVREHQK SQRELDEKVE RRGELRGALL KELAASDDVK RFPGEELQEP LDYTRSLLNT IETVQKKREL LDGKLRDGQK ALENAVEKRN RAEEELKDWQ REWSDALTPL GLDGRALPSE VLDFIETLQS CFERLKEADD FRKRIEGIDR DTTEFERDVE LLVQKIAPDL AGIESNPAVT ELKLRLDRAS QEQAVLNRES EELELLEKAL VTTQTDLRSC EEELAAMRHA ARCETREELI VAEQRSATWI ILSNRQQELE RNLSRIAGGT TLADLELHAE SLNPDELPGR IDLLNKEIVS LLDPEINQLA ESVGRKKNEL ERMNGGSKAA ELAEALQHSL TKIRRLTERY IRIKLATKML RDETERYRQD NEAPVLKIAS RYFTELTLGS FTGLRTDSDD HGKLVLAGVR PNESWLQVEA MSSGTRDQLY LALRLATLEW RTESSEPMPF IVDDILINFD DRRSQATLKA LSELGEKSQV ILFTHHRKIV EAAGEPRFAG KIFIHQLGEE L
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