| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1456 |
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| Symbol | |
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| ID | 6463550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1528136 |
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| End bp | 1530934 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727686 |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_002018327 |
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| Protein GI | 194336533 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACG AGCAGCAAAC CCGCATCGAA TTGATTGACA GGATGTTACT GCAGGCGAGC
TGGAACGTGA ACGATCCTCT CCAGGTTGTA GCAGAGTTCG ATATTCTTGT CGGTTTGCCC
GAAGGGGTGC AGGAACCCCG CACTCCTTAT GAAGGCCATC AGTTCAGCGA CTATGTTTTG
CTGGGTAAGG ATGGCAAACC TCTTGCCGTC GTTGAAGCAA AAAAAACAAG TAGGGATGCA
GCCATTGGCC GTGAACAGGC AAAACAGTAT TGCTGCAATA TCTGGAAACA GTTGGGCGTC
GAGCTTCCAT TCTGTTTTTA TACCAATGGC CTTGAGACCT TTTTCTGGGA TATCGACAAC
TACCCTCCAC GAAAGGTAAT CGGCTTTCCA ACCCGTGATG ACCTTGAGCG GTTCAGCTAT
ATCCGCAGAA GCCGCAAGCC TCTCACCGAA GAACTGATCA ATACAGCCAT TGCCGGACGG
GATTATCAGA TTCGCGCCAT TCGATCCGTC CTCGAAGCCA TTGAACAGAA AAAGCGGGAC
TTCCTGCTCG TTATGGCCAC CGGCACAGGG AAAACCCGCA CCGCAATCGC CATGGTTGAT
GCCCTAATGC GTGGCGGACA TGCTGAAAAA ATTCTTTTTC TGGTCGATCG CATTGCCTTG
CGTGAGCAGG CGCTCTCCGC CTTCAAGGAG CATTTGCCCC ACGAACCTCG CTGGCCCAAC
AGCGGTGAAA AGGTTTTTGC AAAAGATCGC CGTATCTACA TTGCGACCTA CCCAACGATG
CTCAACCTCA TCAGGGATGA ATCATCATAC CTTTCACCCT CTTTCTTTGA CTTCATTGTC
GTAGACGAGA GCCATCGCTC CATCTACAAC ACCTGGGGGG AGATCCTCGA TTACTTCAAA
ACAATCACCC TGGGGCTGAC GGCAACCCCC ACAGATATTC TTGACCACAA CACCTTCAAC
CTCTTTCACT GCGAGAATGG CCTTCCAACC TTTGCCTATA CCTATGAAGA GGCAGTGAAC
AATATTCCGC CATATCTGTG CAATTTCCAG GTGATGAAAA TCCAGACGAA ATTCCAGATG
GAGGGCATCA GCAAGCGGAC AATCTCCCTT GAAGATCAGA AAAAACTGAT TCTCGAAGGC
AAGGATATCG AAGAGATCAA TTTTGAAGGG ACGCAGCTTG AAAAGCAGGT GATCAATCGG
GGGACGAACA GCCTGATTGT CAAAGAGTTC ATGGAAGAGT GCATCAAAGA CCAGAACGGC
GTTCTTCCCG GAAAAACCAT ATTCTTCTGC GCCACCATAG CCCATGCACG CAGAATTGAA
GAGATATTCG ACAGGCTCTA CCCGGAATAC AAAGGCGAAC TTGCCAAGGT TCTGGTTTCC
GATGACCCCC GCGTCTACGG CAAGGGAGGT TTGCTCGATC AGTTTACGAA CAGCGATATG
CCCCGCATCG CCATCAGTGT TGACATGCTC GATACCGGTA TAGACATCCG GGAACTCGTC
AATCTCGTCT TTGTCAAGCC GGTCTACTCC TACACAAAAT TCTGGCAGAT GATTGGCCGA
GGCACGCGGC TCCTTGAACC CGCAAAAATC AAGCCATGGT GCACCAAAAA AGAGCTTTTC
CTGATTCTTG ACTGCTGGGA CAACTTCGAA TATTTCAAGC TTCAGCCCAA AGGCAAAGAG
CTGACACAGC AACTCCCGCT TCCGGTGAAA CTGTTCGGGC TGCGGCTCGA CAAAATTGAA
TATGCCCTCT CAATTGGTAA CACGGCCATT GCAGAACGGG AAGTGGTAAA ACTGCGTAAA
CAGATTGCCG GGCTTCCGCA TACCTCAGTG GTGATCAAAG AGGCCGCATC GCTTCTTCAC
CCTCTGGAAG AGGAGAACTT CTGGATATCT CTCACACCCC AAAAGCTGGA AAATCTGAGA
AGCGAGATCA AACCACTCTT CAGAACCGTC TCGGATGCCG ATTTTAAAGC CATGCGTTTT
GAGCGGGACG TTCTGGAGAG TTCACTGGCA AAACTTCGCG ACCAGAAAGA GCGCTACGGC
ACGCTCAACG ACGGTATTGC CGAGCAGATC AGCCAGCTTC CCCTGAGCGT CGGCTTTGTG
AAACAAGAAG AGGAATTGAT ACGGGCCGCT CAAACGAAAC ACTTCTGGAA CCAGGCTACG
GAAGAGAGCT TCGACGAGCT GATTGAAAAG CTCTCCCAGT TGATGAAGTT TCGCGAGCCT
GATAGCGGCG CAATCGGTCA AGTTCACCTG AACTTGCAGG ATCTTCTGCA CCATAAAGAG
ATGGTTGAAT TCGGCCCCCG AAATGAGGCC GTCAGCATTA CCCGCTACCG CGAAATGGTT
GAATCGCTCA TTACCGAACT GACAAAACAG AATCCGATTC TTTCCAAAAT CAAGGAGGGT
AAAGAGATTT CCCCTGAAGA GGCCACTGAA CTTGCGGAGC TGCTCCACGA AGAGCATCCG
CACATTACCG AGGAGCTGTT GCGTGCCGTC TATCAAAACC GCAAGGCCCA TTTCATCCAG
TTTATCCGCC ATATTCTCGG CCTCGAAATT CTCAAGAGCT TCCCTGAAAC GGTTGCCGAT
GCGTTCAATC AGTTTATCAA ACAGCATTCC AACTTTTCCA CTCGCCAACT CGACTTTTTA
AACCTCCTCA AAAACGTTCT TGCGGAACGT GAAAAAGTTG AAAAAAGAGA CCTGATCAAC
GCCCCCTTCA CGGTCATCCA CCCGAAAGGC ATTCGCGGAG TCTTCAGTCC GGCTGAAATC
AATGAAATTC TGGCATTGGC CCGGCAACTT GCAGCATAA
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| Protein sequence | MKNEQQTRIE LIDRMLLQAS WNVNDPLQVV AEFDILVGLP EGVQEPRTPY EGHQFSDYVL
LGKDGKPLAV VEAKKTSRDA AIGREQAKQY CCNIWKQLGV ELPFCFYTNG LETFFWDIDN
YPPRKVIGFP TRDDLERFSY IRRSRKPLTE ELINTAIAGR DYQIRAIRSV LEAIEQKKRD
FLLVMATGTG KTRTAIAMVD ALMRGGHAEK ILFLVDRIAL REQALSAFKE HLPHEPRWPN
SGEKVFAKDR RIYIATYPTM LNLIRDESSY LSPSFFDFIV VDESHRSIYN TWGEILDYFK
TITLGLTATP TDILDHNTFN LFHCENGLPT FAYTYEEAVN NIPPYLCNFQ VMKIQTKFQM
EGISKRTISL EDQKKLILEG KDIEEINFEG TQLEKQVINR GTNSLIVKEF MEECIKDQNG
VLPGKTIFFC ATIAHARRIE EIFDRLYPEY KGELAKVLVS DDPRVYGKGG LLDQFTNSDM
PRIAISVDML DTGIDIRELV NLVFVKPVYS YTKFWQMIGR GTRLLEPAKI KPWCTKKELF
LILDCWDNFE YFKLQPKGKE LTQQLPLPVK LFGLRLDKIE YALSIGNTAI AEREVVKLRK
QIAGLPHTSV VIKEAASLLH PLEEENFWIS LTPQKLENLR SEIKPLFRTV SDADFKAMRF
ERDVLESSLA KLRDQKERYG TLNDGIAEQI SQLPLSVGFV KQEEELIRAA QTKHFWNQAT
EESFDELIEK LSQLMKFREP DSGAIGQVHL NLQDLLHHKE MVEFGPRNEA VSITRYREMV
ESLITELTKQ NPILSKIKEG KEISPEEATE LAELLHEEHP HITEELLRAV YQNRKAHFIQ
FIRHILGLEI LKSFPETVAD AFNQFIKQHS NFSTRQLDFL NLLKNVLAER EKVEKRDLIN
APFTVIHPKG IRGVFSPAEI NEILALARQL AA
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