| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1436 |
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| Symbol | |
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| ID | 6463578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1512689 |
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| End bp | 1514764 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727669 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002018310 |
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| Protein GI | 194336516 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000631982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTATA CGTCGGCAAG GGCATTGGAG CTTCTCAGGA TTGGTTCCGG TTATCCCTGT
GCGGTGTTCC GTGAGAGTCA GGAGGAGGCA ATTCGTTATA TCGTTGAAGG TCAGGGACGA
TTGTTGGTTG TCCAGAAGAC TGGCTGGGGT AAAAGCTTTG TCTATTTTAT CGCTACCAAA
TTGCTTCGTG AAGGGGGTAA TGGTCCAGCG CTCTTGATTT CACCATTGCT TGCATTGATG
CGAAATCAGA TTGAGGCTGC AGAGCGAATG GGTGTACATG CAGTGACGAT CAACTCAGAT
AATCCGGATG ACTGGGCTGA AGTTGAAATG AGCATCGCTC GTAATGCGAT AGATATTCTG
ATCATTTCAC CTGAACGACT TGCGAATGAA CGCTTCCGCA CCAATGTTCT GGCTCCTATT
GCTTCGCAGA TTGCGATGTT GGTTATTGAT GAAGCGCACT GTATTTCTGA CTGGGGGCAC
GACTTTCGAC CCCACTACCG ACTGCTCGAA CGGATTGTCA AAACCTTGCC ACCAAACCTG
CGACTTCTGG CAACTACTGC TACCGCAAAC AATCGTGTCA TGGATGATTT AGTCGAAGTG
CTTGGGCCGC AATTGGAGGT GTTCCGTGGT GATTTGAATC GTCCTTCGTT GACCTTGCAA
ACCATATCTC TACCTGATCA AGCCCAGCGC CTTGCATGGC TGGCTGAACA GCTCGATACG
CTTCAAGGCC ACGGAATCAT CTATACCCTC ACCGTTCGTG ACGCGAACAT GGTTGCAGGT
TGGCTGAAAA GTCGTGGGTT CAATGTTGAA GCCTACACGG GCGAAACTGG TGATCGCCGG
CCGGAGTTTG AGCAGGCTCT GCTTAATAAC CGGGTTAAAG CTCTTGTTGC TACTTCCGCA
CTGGGAATGG GTTACGATAA GCCGGATCTG GCATTTGTGA TTCATTATCA GATGCCGGGA
TCGGTTGTTG CCTATTATCA GCAGGTAGGG CGTGCTGGAC GTGCTCTTGA ATCAGCATAT
GGTATCTTGC TGAGTGGCAG GGAAGAGACG GATATTACTG ATTGGTTTAT CAAGAGCGCT
TTTCCGACCA GGCAGGAAGT TGATGATGTC ATTAACGCTC TTGAAAATGA ACCTTCGGGG
CTCTCTGTGC CTGAACTTCA GGGAAAAGTG AATATCAGCT ATGGACGTAT TGAAAAGACC
ATTGCATTGC TCTCGCTGGA ATCACCCGCC CCTGTCGCAA AGCAAGGGAG CAAGTGGCAA
TTGACAGCCG CCAAACTTGG TGAAGGATTT TGGGCTCGTG CGGATCGACT TACCGCGTTA
CGTCGTGATG AACAACGACA AATGCAGGAA TATCTTAAAC TTCCATTTGG TGAACATATG
GGGTTTCTTG TTCAGGCGCT TGATGGTGAT CCGAATGAGG TCAGTTTTCC TTTATTGTTA
CCGTTACCGA TAACTGTTGA AGAGGCTCTT GTTCAGGAGG CTGTCGCTTT TTTGCGCCGC
ACCAGTTTGC CTATTGAGCC AAGACTTCAG TGGCCTGCCG GTGGTATGCC ACAATATCGG
GTGAAAGGAA AAATTCCTGT AAACCTGCAG GCAGGGCCCG GAAAAACACT CTGTGTTTGG
GGTGATGCAG GGTGGGGTGG ACTCGTCAGA CAAGGAAAAT ATCATGACAA CTGTTTTTCT
GATATTTTGG TTACTGCTTG TGTTGAAATG ATTCAGCAAT GGAATCCGGA ACCAGCACCG
ACATGGGTAA CGTGCGTTCC GTCGTTGCGT CACCCCAATC TCGTTCCGGA TTTTGCGAAG
CGCCTTGCTG ATGCTCTGGG ACTGCCGTTT CAACTGCTTC TTGTAAAAAC AAATAACCGG
CCAGAACAGA AAACAATGGC AAACAGTACC CAACAGGCTC GAAATATTGA TGGTTCACTC
GCGGTCAAGG AACAAAGAGT GCCGGATGGT CCGGTTCTTC TGGTTGACGA CATGGTAGAT
TCTCGCTGGA CATTGACGGT ATCTGCCTGG CTCTTGAGAA CATATGGAAG TGGTGAGGTT
TGGCCTTTGG CACTTGCTCA AACAGGATAC GATTAA
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| Protein sequence | MMYTSARALE LLRIGSGYPC AVFRESQEEA IRYIVEGQGR LLVVQKTGWG KSFVYFIATK
LLREGGNGPA LLISPLLALM RNQIEAAERM GVHAVTINSD NPDDWAEVEM SIARNAIDIL
IISPERLANE RFRTNVLAPI ASQIAMLVID EAHCISDWGH DFRPHYRLLE RIVKTLPPNL
RLLATTATAN NRVMDDLVEV LGPQLEVFRG DLNRPSLTLQ TISLPDQAQR LAWLAEQLDT
LQGHGIIYTL TVRDANMVAG WLKSRGFNVE AYTGETGDRR PEFEQALLNN RVKALVATSA
LGMGYDKPDL AFVIHYQMPG SVVAYYQQVG RAGRALESAY GILLSGREET DITDWFIKSA
FPTRQEVDDV INALENEPSG LSVPELQGKV NISYGRIEKT IALLSLESPA PVAKQGSKWQ
LTAAKLGEGF WARADRLTAL RRDEQRQMQE YLKLPFGEHM GFLVQALDGD PNEVSFPLLL
PLPITVEEAL VQEAVAFLRR TSLPIEPRLQ WPAGGMPQYR VKGKIPVNLQ AGPGKTLCVW
GDAGWGGLVR QGKYHDNCFS DILVTACVEM IQQWNPEPAP TWVTCVPSLR HPNLVPDFAK
RLADALGLPF QLLLVKTNNR PEQKTMANST QQARNIDGSL AVKEQRVPDG PVLLVDDMVD
SRWTLTVSAW LLRTYGSGEV WPLALAQTGY D
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