| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1432 |
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| Symbol | |
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| ID | 6463581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1502841 |
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| End bp | 1504571 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727665 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_002018306 |
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| Protein GI | 194336512 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00407883 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGAG TGTATCAGGA ACGGGCTATC GATCGCCATT TTGCAGCATT TATCTGCCAC
CAGGCGACTG GCAGGGTAAG TGAGCTGTTC CGTCTTGTTG TATCCCTTGC CAGTAGCGCT
GTCGGGCAGG GGAGCAGTTG CCTGAACCTT CAGGATATTG CGGAAGAGAG CATTGTAATT
GAGAACAAGG AGTTTCGTCT TCCCCGACTT GATGCTCTGA TGGAGCTTTT GAAGAGCGCT
ACTGTCGTCA GTTTTCCCGG CGGCCACTTT CGTCCTTTGG TGCTTGATGC TACCGGTCGC
CTCTATCTCT ACCGTTACTG GCATTATGAA CAGGAGCTCC AAAGAACGAT TCTTCGAAAA
GCAGGAGCCG CTTTTGACAA TATTGATGAA ACCATACTGC TTGACGCTCT TGAACGACTT
TTTCCGTCAA GTGGCAGGCG GGAAAGTGAC CGTCAGAAGG ATGCGACTGT TTTTGCCCTG
CGCAGGCAGT TCTGTGTTCT TTCCGGCGCA CCGGGAACAG GTAAAACTTC GACGGTTGTT
CGCATTCTTG CTCTGCTGCG TGAGCAGAAG TGGGGGATGA AGCAGCGGAT CGCCATGGCG
GCTCCAACAG GGAAGGCAGC GGCAAGGCTG AAAACATCCA TCAGTGATAT CAAACGCACT
CTTGACTGTT CAGATGAGGT GAAATCAGCA ATTCCTGACG ATGTTGTCAC GATTCATCGC
CTTCTCGGAA CCATTTCGGG TTCCTCCCGC TTTCGCCATT CGGCAAGCAA TCCTCTTCCT
TTTGATACCG TTATCATTGA CGAAGCCTCA ATGGTTGCTC TGCCACTGAT GAGTCTGCTG
GTAACAGCAC TCAAAGCTGA CGCACGTCTT ATTCTTCTTG GTGATCACAA TCAGCTCGCA
TCGGTTGAAG CTGGTTCGGT GTTTGGAGAT ATTTGCAGTG CAGGATCAGA TAACAATGCC
TCACCACTAA GCAATTCGAT GGTTTTGCTT GAAAAAAACT ATCGTTTTCA TCCTGGCAGT
GGTATTGCTG AAATCAGTCG GGCCGTCAAT GAAGGGCTGG AAAGGGAAGC TGTAAGCCTT
CTGAAAAGGA GTAGGTCAAG CGGTGTCACC TGGCAGGAGT TGCCTGCACC TGAAGAGCTG
CAACATGCTC TGGCAAACAA AGCAGTCGAA GGCTTTCACA GCTACCTTGA TGCTGCATCG
CCCGCTGAGG CGCTGGAGCG GTTTGACCGT TTCAGAATAC TCTGTGCCCT TCGCGACGGC
CCCTATGGGG TAAGTGGACT TAATCGAACA GTCGAAAACA TCCTCGCCCG TAAGGCTCTT
ATCAGTCCGG CCAGCACCTT CTATCGCGGC CGTCCATTGA TGATTACGGT CAACAACTAT
GCAATGCGTC TCTTTAATGG CGACACAGGC ATACTTTTCC CCGATCCTGA AAATGGAGGT
TCCCTAAGAG CCTTTTTTTT CGCTCCAGAT GGCGAAATCC GCAGCATCGC ACCGGAGCGG
CTGCCTCAGC ATGAAACCGC ATTTGCCATA ACCATTCACA AAAGTCAGGG CTCGGAGTTT
GATCGCCTGC TGATGCTTCT GCCACCGATT GACAGTGAAA TCCTCACAAG AGAACTTATA
TACACTGGTA TTACAAGGGC AAAAGAGAGC GTTGAAATCT GGGCGAATGA AGAGGTTTTC
TGTGCTGCGG TAAAAAAACA AACAAAAAGG AGCTCTGGTT TACATTTCTG A
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| Protein sequence | MSRVYQERAI DRHFAAFICH QATGRVSELF RLVVSLASSA VGQGSSCLNL QDIAEESIVI
ENKEFRLPRL DALMELLKSA TVVSFPGGHF RPLVLDATGR LYLYRYWHYE QELQRTILRK
AGAAFDNIDE TILLDALERL FPSSGRRESD RQKDATVFAL RRQFCVLSGA PGTGKTSTVV
RILALLREQK WGMKQRIAMA APTGKAAARL KTSISDIKRT LDCSDEVKSA IPDDVVTIHR
LLGTISGSSR FRHSASNPLP FDTVIIDEAS MVALPLMSLL VTALKADARL ILLGDHNQLA
SVEAGSVFGD ICSAGSDNNA SPLSNSMVLL EKNYRFHPGS GIAEISRAVN EGLEREAVSL
LKRSRSSGVT WQELPAPEEL QHALANKAVE GFHSYLDAAS PAEALERFDR FRILCALRDG
PYGVSGLNRT VENILARKAL ISPASTFYRG RPLMITVNNY AMRLFNGDTG ILFPDPENGG
SLRAFFFAPD GEIRSIAPER LPQHETAFAI TIHKSQGSEF DRLLMLLPPI DSEILTRELI
YTGITRAKES VEIWANEEVF CAAVKKQTKR SSGLHF
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