| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1427 |
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| Symbol | |
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| ID | 6462367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1496075 |
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| End bp | 1498579 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642727661 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002018302 |
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| Protein GI | 194336508 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC ACAGCAAGAA AGAAGAGAAT GGCCATTCAG AACGCAAGCA GACTCCTGAG
TCGTTCATTG ATCGTGAATC GTGCCATAGG GATCTTATTG ATTACATGCA CAATGGTTAT
GCCTATTGCA AGGTAATTTA TGAGGAGGGT CACCCGGTAG ATTTTATCCA TATAGAGGTT
AATGCCAGTT ATGAAACACT GACGGGCTTG ACGCAGGTTA CCGGGCGACG AGCTACAGAG
GTTTTTCCCG GTATTGAAAA ATCACATCCC GAATTTATTG AAAGACAGGC TGGTGTTGCC
GAGAGCGGGA TCACGGATCG GTTTGAACTG TATATGGAAA CGTTGGCGTT ATGGCTTGAT
ATCTCCGTCT ATAGTCCCGA AAAAGGATAC TTCGTATCGA TAATCGATAA CATAACAGAG
CGAAAAGAGG CCGAAGCGAC GATACTGCGA AATGAAGTCC GTTTCCGAAA ACTCTTTGAA
AGCCATTCAG CCATCAAATT GCTTCTTGAT CCAGTTACTG GCACTATTAT TGATGCCAAC
TTTGCTGCTG CCGAGTTTTA TGGATGGTCG ATTGAAGAGC TTCGCCGTAT GCGTATACAG
GAAATCAATC CGAGCTCAGA TCAAGAGGTC ATAACGAATC CGGAAGGTAT CAGTACATCG
AAACAAAACC TTTTGTTATG TCAGCATCTC AAGGCTGATG GTTCTTTGTG CGATGTTGAG
GTATTCAGCA ACAAGGTTGA AATTGAGGGG AAAGAGCTTC TTTACGCAAT TATCCATGAC
ATCACTGAAC GCAAGCAGGC AGAAAAGGCT TTGCTTCAGA GTGAAACGCG ATTCAGAAAA
CTCTTTCAAG GCCATTCTGC TATCATGATC GTCATCGATC CGGTTACAGG CCGCATCGTT
GATGCCAATC AGGCGGCTGC GGATTTTTAT GGGTGGACAA TCAAGCAGCT CCGACGGATG
TGCATACAGG AAATCAATAC GCTCCCTTCT GAAGTGGTGA AAGAGGAGAT GGAGAACAGC
GTAACATCGA AAAAAAATTA CTTTTTATTT CGTCATTTGA GGGCTGACGG CTCTTTTCGT
GATGTGGAAG TGTTCAGTAA CAAGGTTGAA ATTGCAGGGA GCATTCTCCT CTATTCCATT
ATTCATGACG TTACCGAGCG GATGCGTTAT GAATTTCTCA TTACGTTCCG CCTTCGTACC
CTCCAAATGG CAGAAACCTC TTCGGTGGAA GTGTTGCTAC AAATGACATT GGATGAGGCC
GAACGGATGA CGCAAAGTTC TATCGGGTTT GTTTTTTTTG TCTCGAAAGA CCAGATGTCA
CTTTCACTGC GAGCCTGTTC AACCAACTCC TTTCAGAATA TGTCGCTGGC GGATGGAATG
GGTGGGCAGT ATCCTTTGGA AAAGGCTGGG GTATGGGCGG ATGCTTTACG GGAACGGAGA
TCGGTAATTC ATAATGATTA TTCAGCGCTC AAGCATCTCA AAGGAATGCC AAAGGGCCAT
CATGAAGTTA CACGCGAACT GGTTGTACCA GTCATTCGTG ACGACAGGGT TGTTGCAATC
ATGGGAATTG GAAATAAACC GGGGGATTAT GACGAGAACG ATGTTAACTG GTTAAATATC
CTTGCAAATC AGACCTGGGA CATTATTGCA AAAAAAATCG CCGAAGAAGA ACGCGAAAAG
ATGCTCTATC AGCTTCGGCA CTCCCAGAAA ATGGAGATGG TCGGTCAGCT TGCTGCAGGC
ATTGCCCACG AAATCAACAA CCCGCTGAAT TTTATCACGA TAAATTTTGC AAATATCAAG
GAAATCACTT CCGATTTACA ATCTATTCTC AAAGAGTATC AAAACCTTAC CAGCAAACTT
GAGAATGGCA CCTTTTCTGA CCGTGACCTG CAGCAGTTGC GCCAAAAAGA GGTAGAACTT
GCTCTTGATA CGCTGGTCAA TGATATCCCG GAGATTCTTC ATGAATCACA ACGTGGTTTT
GAGCGTATTA CCACGATTAT CAATGGCATG AGGAACTTGT CGCACCGTTA CGCGGCTGAC
AAAAAGATTC TTTTCGATAT CAATAAAGGA GTCATTGATA CGCTCACCAT TACAAGTCAT
GAACACAGTG TATGCGCCGA CATCACCACT GAGTTTGGGG AGTTGCCGCT TGTTGAGTGT
AATCCGGAGG AAATCAAGCA GGTATTGCTC AACCTGATTC TCAACGCTGT CCATGCCATC
AAGTCACAAC AGCGAAATGC AAAGGGCACA ATCGCTCTGC ATACCTGGTT CGACAGCAAC
AATGTCTACT GTTCAATTAC TGATAACGGA CCCGGCATAC CGGAAGCAAT TCGAAACGAT
ATTTTTAACC CGTTTTTTAC CACCAGAAGC TCCGAAAAAT GTACGGGGCT TGGGTTAAGC
ATTGCCTATG ATATTATTGT AACGAAACAT AAAGGGACTA TTTCTGTTAC GTTTCCTGAC
GGTGCTACGG TATTTACCAT ATCGTTACCA CGGCAAATAC CCTGA
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| Protein sequence | MTDHSKKEEN GHSERKQTPE SFIDRESCHR DLIDYMHNGY AYCKVIYEEG HPVDFIHIEV
NASYETLTGL TQVTGRRATE VFPGIEKSHP EFIERQAGVA ESGITDRFEL YMETLALWLD
ISVYSPEKGY FVSIIDNITE RKEAEATILR NEVRFRKLFE SHSAIKLLLD PVTGTIIDAN
FAAAEFYGWS IEELRRMRIQ EINPSSDQEV ITNPEGISTS KQNLLLCQHL KADGSLCDVE
VFSNKVEIEG KELLYAIIHD ITERKQAEKA LLQSETRFRK LFQGHSAIMI VIDPVTGRIV
DANQAAADFY GWTIKQLRRM CIQEINTLPS EVVKEEMENS VTSKKNYFLF RHLRADGSFR
DVEVFSNKVE IAGSILLYSI IHDVTERMRY EFLITFRLRT LQMAETSSVE VLLQMTLDEA
ERMTQSSIGF VFFVSKDQMS LSLRACSTNS FQNMSLADGM GGQYPLEKAG VWADALRERR
SVIHNDYSAL KHLKGMPKGH HEVTRELVVP VIRDDRVVAI MGIGNKPGDY DENDVNWLNI
LANQTWDIIA KKIAEEEREK MLYQLRHSQK MEMVGQLAAG IAHEINNPLN FITINFANIK
EITSDLQSIL KEYQNLTSKL ENGTFSDRDL QQLRQKEVEL ALDTLVNDIP EILHESQRGF
ERITTIINGM RNLSHRYAAD KKILFDINKG VIDTLTITSH EHSVCADITT EFGELPLVEC
NPEEIKQVLL NLILNAVHAI KSQQRNAKGT IALHTWFDSN NVYCSITDNG PGIPEAIRND
IFNPFFTTRS SEKCTGLGLS IAYDIIVTKH KGTISVTFPD GATVFTISLP RQIP
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