| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1422 |
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| Symbol | |
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| ID | 6463588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1484909 |
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| End bp | 1487785 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642727657 |
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| Product | helicase domain protein |
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| Protein accession | YP_002018298 |
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| Protein GI | 194336504 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATAA CCTATCAACC AGGGAAACTG CTCTCCCTTC GAGGGCGCAA TTGGATTGTC
ATGCCCTCCG ATGACCCCGA TCTTCTGGTC GTCAAGCCCC TTGGCGGCTC TGATGATGAG
ATTGCAGGCA TTTATCTCCC TCTGGCCATT CCCCGTGATG AGCCACAGGA GACCGAGTTT
GGCCAACCAA CCGGCAGTGA CCTCGGCGAT ATCAGTACCG CCCGACTGCT CTACGATTCA
GCCCGTCTGG CATTTCGAAA TGGCGCAGGC CCCTTTCGTG CACTGGCAAA GCTCTCTTTT
CGTCCACGCT CCTACCAAAT GGTTCCTTTG GTAATGGCGC TTCGGCAGGA GCTGATTCGC
CTCTTGATTG CTGATGATGT TGGTGTGGGT AAAACCATCG AAGCGCTCCT CATTGCCAAA
GAGATGCTGG AGCGCCGCAA AATCCAGCGC TTCGCGGTTG TCTGCCTCCC TCATCTCTGC
GAACAGTGGC AGCAGGAGAT TCGCGACAAA CTCGATATTG AGGCCGTTAT CATCCGCTCC
AACACCCAGG CACGCCTTGA CCGGCAGATT CAGGGCGATA CCAGCGTCTA TGATTACTAT
CCCTATCAGG TTATCAGTAT TGACTTTATA AAATCTGACA ATCGCCGGGA TGTTTTTGTG
CAGCAATGCC CGGAACTGGT TATTGTAGAC GAAGCCCACA CCTGCGCCCG CCCGGCCGGG
GCCTCAAAAA GCCAGCAGCA GCGTTACCAT CTGCTGAGTC GTCTGGCAGG CAAGCCAGAG
CAGCAGCTCA TTCTTCTCAC GGCCACCCCG CACTCCGGCA AGCCGGAAGA GTTTCACTCC
CTGCTCGGGT TACTCAAACC GGATTTTGAA GGGCTTGATT TGCCGACGGC ATCACAGCCC
CAGCGCAAGG AGCTTGCCCG TCATTTTGTG CAGCGCAAAC GGGGTGACGT TGAAAAGTGG
ATGGGTGAGG AAACTCCCTT CCCCAAGCGT GAAGCCATTG AGTGGGCTTA TGATCTCTCT
CGGCAGTATG AACTGTTTTT TGAGCAGATC CTCGAATTCG CAAAAAAACT GATTGCCCCG
GACGCTTCAA AAAAGGGCCC CCGACGGGTG CAGTACTGGA CGGCGCTTGC CCTTTTGCGT
GGAGTGATGT CGAGCCCGGC AGCCGGTATT GAAATGCTCA ACACCCGGCT CTCCAACCTT
GCCCACGTTG CCCTTGACGA AGGGATGGCC GAAAACAGTG AGAACCCTGT GCAGGATAGT
GAGTTTGGCT ATGAGGGCGA TAACACCCCG ACCTCACTGC TTGAGCAAAC CGACTGGTCA
AGCTACCAGC GGCAACAACT GCGAGGCTTT GCGGATCAAC TGGCAGCTCT CTCTGACCTG
AAGCACGACC AGAAATGCGG CACGGCGGAA GCCATTCTGG AAGATTGGCT CTCGGCGGGC
TTCAACCCCG TTGTTTTTTG CCGCTACATC GCGACGGCCA ACTACGTCGG GAGGTTGCTC
GCTCCAGCTC TCCACAAAAA ATATCCCAAG CTCGATATTC AGGTTATCAC CAGCGAACTG
CCTGACGAAC TCCGCAAGCA GAAGATTGAT GAGATGGGCA AGGCAAAGCA AAGGCTCCTG
ATTGCAACCG ACTGCCTCAG CGAAGGCATC AACCTGCAGC AGCAGTTTAC GGCGGTGCTG
CACTACGATC TTCCCTGGAA TCCCAACCGT CTCGAACAGC GCGAAGGGCG GGTAGACCGT
TTCGGCCAGC CAGCGCCGGA AGTCAAAACC TGCCTGCTCT ACGGCGCCGA TAATCCCATT
GACGGCATTG TGCTTGATGT TTTGCTGCGC AAGGTTCGCG AAATCAAACG CTCAACCGGA
ATCAACGTCC CCTTTCCGGA AGATTCCCAA AGCATTATCG ACACCATCAC TCAGGCGCTC
CTGCTCAATC CCGACCGCAA AATCACTCCC CGGCGTGAAG GAAAGCAGCA GTTGACCTTC
GACTTCAGCG ATTTTGATGA GGCACTCTCA GCCAAGGTCA CCATCTCCCG CAAAATAGAG
GAGGCCGCCG AGCGCGAAAA AGCGACCCGT ACCATCTTTG CCCAGAACGC CATCAAGGCC
TCCGAAATAG AGTCCGACCT TCGGGAGGTG GATGAGGCCA TTGGTGACCC CTTTGCCGTT
GAACAGTTTG TGACCAGCAC CCTCAATAAC CTTTTTGGCG TACAGGTTAT TGCTCAACAG
AAAAAGGGAT GCTATCGCCT CATTACCGCC AACCTTCCTG ACCAGTTGCG CGGCATCCTG
CCCGTTGGCG ATATCGTCCA GATCAGCTTT CTCTCACCAA CGCCTGAAGG CTATCACTAC
CTTGGGCGCA ACAATCGCTT TGTGGAACAG CTCTGCCAGC TCCTCATGGC CAACACCGTC
AACCGTTCCG GCAAACGGGC CGCCCGTTCC GCCGTCATTC GCACCCGGCA GGTGGCCATC
AAAACAACCA TTCTCCTCTT CCGCTGCCGC AACGTTATCG AAGATCGGAG AGGGAGCCAG
CAGATTGTGG CCGAAGAGAT GATTCTCTGG GGATGGAAAG GAACTCCGCA GGAGAAGGAG
TTCCTCGATC AGGCAGAGGC AAAAGCGCTT CTCGCCTCAG TTCGTGCCAG CTCCGATATG
TCGCTCCCCG CCAGAACAGG GTTTCTGGAG AATGAATTGA AACTGCTCAA ATCGTTTGAA
CCTGAATTTG ACCGCGTGGC TGAACAACAA TCAAAAAAAC TGGTCGAAGC CCATGAACGG
TTCAGTTCCC TGATGGACGG CAAGCGTTTC CAGGTGGTGC ACCCGGTACT GCCGATGGAT
CTGCTCGGTG TATATATTCT CCTGCCGGAA GGCGAAGCTG CGGGAGGTGC CGTATGA
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| Protein sequence | MSITYQPGKL LSLRGRNWIV MPSDDPDLLV VKPLGGSDDE IAGIYLPLAI PRDEPQETEF
GQPTGSDLGD ISTARLLYDS ARLAFRNGAG PFRALAKLSF RPRSYQMVPL VMALRQELIR
LLIADDVGVG KTIEALLIAK EMLERRKIQR FAVVCLPHLC EQWQQEIRDK LDIEAVIIRS
NTQARLDRQI QGDTSVYDYY PYQVISIDFI KSDNRRDVFV QQCPELVIVD EAHTCARPAG
ASKSQQQRYH LLSRLAGKPE QQLILLTATP HSGKPEEFHS LLGLLKPDFE GLDLPTASQP
QRKELARHFV QRKRGDVEKW MGEETPFPKR EAIEWAYDLS RQYELFFEQI LEFAKKLIAP
DASKKGPRRV QYWTALALLR GVMSSPAAGI EMLNTRLSNL AHVALDEGMA ENSENPVQDS
EFGYEGDNTP TSLLEQTDWS SYQRQQLRGF ADQLAALSDL KHDQKCGTAE AILEDWLSAG
FNPVVFCRYI ATANYVGRLL APALHKKYPK LDIQVITSEL PDELRKQKID EMGKAKQRLL
IATDCLSEGI NLQQQFTAVL HYDLPWNPNR LEQREGRVDR FGQPAPEVKT CLLYGADNPI
DGIVLDVLLR KVREIKRSTG INVPFPEDSQ SIIDTITQAL LLNPDRKITP RREGKQQLTF
DFSDFDEALS AKVTISRKIE EAAEREKATR TIFAQNAIKA SEIESDLREV DEAIGDPFAV
EQFVTSTLNN LFGVQVIAQQ KKGCYRLITA NLPDQLRGIL PVGDIVQISF LSPTPEGYHY
LGRNNRFVEQ LCQLLMANTV NRSGKRAARS AVIRTRQVAI KTTILLFRCR NVIEDRRGSQ
QIVAEEMILW GWKGTPQEKE FLDQAEAKAL LASVRASSDM SLPARTGFLE NELKLLKSFE
PEFDRVAEQQ SKKLVEAHER FSSLMDGKRF QVVHPVLPMD LLGVYILLPE GEAAGGAV
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