Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1416 |
Symbol | |
ID | 6463596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1473568 |
End bp | 1474011 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642727652 |
Product | transposase IS200-family protein |
Protein accession | YP_002018293 |
Protein GI | 194336499 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0553663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAT ATATTCACAA GAGCCACAAT GTCACCGTTC TGATGTATCA CATAGTGCTA CCAGCAAAGT ATAGACGCGT GATTTTTGAT AATGAGGTGG ATGAAGTCCT AAAAGACGTG TGCTTGGACA TAGAAAATCG TTATCAGATC AAGTTCCTGG AAATTGGTAC AGATAAAGAT CATGTGCATT TTTTGGTGCA ATCAGTGCCA ACGTATAGTG TCACGAAAAT CGTGACGATG ATAAAGAGTA TTTCTGCTCG AGAAGTGTTC AGGCGATGTC CCAAAGTAAA AAAACTGTTG TGGGGTGGTG AGATGTGGAC GGATGGGTAT TATGCCGGAA CGGTTGGAAA GCATGGAAAT GAAGACATGA TAGGCAAGTA TGTCAAAGGG CAGGGCGGTA CGTATCAGAA ACGCTACAGT GATTATCAGT TGTCACTGTT CTAA
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Protein sequence | MSEYIHKSHN VTVLMYHIVL PAKYRRVIFD NEVDEVLKDV CLDIENRYQI KFLEIGTDKD HVHFLVQSVP TYSVTKIVTM IKSISAREVF RRCPKVKKLL WGGEMWTDGY YAGTVGKHGN EDMIGKYVKG QGGTYQKRYS DYQLSLF
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