Gene Ppha_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1416 
Symbol 
ID6463596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1473568 
End bp1474011 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content42% 
IMG OID642727652 
Producttransposase IS200-family protein 
Protein accessionYP_002018293 
Protein GI194336499 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0553663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAT ATATTCACAA GAGCCACAAT GTCACCGTTC TGATGTATCA CATAGTGCTA 
CCAGCAAAGT ATAGACGCGT GATTTTTGAT AATGAGGTGG ATGAAGTCCT AAAAGACGTG
TGCTTGGACA TAGAAAATCG TTATCAGATC AAGTTCCTGG AAATTGGTAC AGATAAAGAT
CATGTGCATT TTTTGGTGCA ATCAGTGCCA ACGTATAGTG TCACGAAAAT CGTGACGATG
ATAAAGAGTA TTTCTGCTCG AGAAGTGTTC AGGCGATGTC CCAAAGTAAA AAAACTGTTG
TGGGGTGGTG AGATGTGGAC GGATGGGTAT TATGCCGGAA CGGTTGGAAA GCATGGAAAT
GAAGACATGA TAGGCAAGTA TGTCAAAGGG CAGGGCGGTA CGTATCAGAA ACGCTACAGT
GATTATCAGT TGTCACTGTT CTAA
 
Protein sequence
MSEYIHKSHN VTVLMYHIVL PAKYRRVIFD NEVDEVLKDV CLDIENRYQI KFLEIGTDKD 
HVHFLVQSVP TYSVTKIVTM IKSISAREVF RRCPKVKKLL WGGEMWTDGY YAGTVGKHGN
EDMIGKYVKG QGGTYQKRYS DYQLSLF