| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1393 |
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| Symbol | |
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| ID | 6463622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1456829 |
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| End bp | 1458661 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727632 |
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| Product | ATP-citrate lyase/succinyl-CoA ligase |
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| Protein accession | YP_002018273 |
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| Protein GI | 194336479 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit
[COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.025075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTATTT TAGCAAATAA GGATACACGA GCGGTCATCA TTGGCGGTAT TGCTGGATTG
AATGCTGCAA GGCGGATGGC TCAGTTCGAC TTTCTGATCA ATCGACCGCT GACGGTGCAG
GCGTTTGTTT ACCCGCCAGA GGAAGGGCAA CAGAAAGAGA TTTACCGTGG CGGCGAACTG
AACAACGTTA CTGTTTATTC GTCACTCGAA AAAGCCCTCG AGGAAAACCC TCAGATCAAT
ACAGCGCTTA TCTATATCGG TGCATCCCGG GCATACCAGT CAGCAAAAGA GGCCCTTGAT
GCAAAAGGGA TCAAGCTTGT GACCATGATC ACCGAAGGTG TGCCGGAAAA GGATGCCAAA
CGACTGCGCA AACATGCAAT CGACAGCGGC AAAATCTTCA ACGGGCCATC CTCTATCGGT
ATCATGTCGG CAGGGGAGTG TCGCCTTGGT GTTATTGGCG GAGAGTTCAA AAACCTGAAA
CTCTGTAATC TCTATCGTCC AGGCTCATTT GGTGTCATTA CCAAATCGGG TGGCCTTTCG
AACGAAGCCA TGTGGTTATG TGCCCAGAAT GGCAACGGAA TCACCTCAGC CGTAGCTATC
GGTGGAGACT CCTATCCTGG AACGGACTTC GTGACCTATC TCAATATGTT TGAAAACGAT
CCTGATACCA AGGCAGTCGT TATCATCGGA GAAGTGGGTG GGACGCTTGA GGAAGAGGCT
GCGGAATGGC TTGGCAAGGA AATACGCCGA ATCAAACTGA TCGCTTCAAT TGGTGGTACC
TGTCAGGATG TGCTGCCACA AGGCATGAAA TTTGGCCATG CTGGCGCAAA AGAAGGAAAA
AAAGGTCTTG GATCGGCACG CTCCAAGATA AATGCCCTTC GTGAAGCAGG CGCAGTTGTT
CCTGATACCT TTGGTGGACT CAGCAAGGCT ATCAAACAGG TCTATCTGGA ACTGAAGGCG
AGTGGCGTTA TCAAGCCTGA GCCGGAACTC GACGAAAAAT TGTTGCCACA ACTTCCTCCA
AGTGTTCAGG AAGTCATGAA GCAAGGCGAT ATTATTGTCG AGCCACTCAT CCGTACCACC
ATTTCTGACG ATCGTGGTGA AGAGCCCCGT TATGTTGGCT ATGCGGCATC GGAACTCTGT
GAAAAAGGCT ACGGTATTGA GGACGTTATC GGACTTCTGT GGAACAAGAA GCTTCCATCA
AAAGAAGAGT CTGAGATCAT CAAACGCATT ATCATGATTT CAGCCGATCA CGGCCCGGCA
GTTTCTGGCG CATTCGGCTC CATTATCGCG GCATGTGCAG GCATCGACTT GCCTCAGGCT
GTTTCAGCAG GCATGACCAT GATTGGGCCA AGATTTGGAG GCGCAGTCAC CAATGCCGGA
AAATATTTCA AGTATGGCGT CAAGGAGTAT CCTAACGACA TTCCTGGATT TTTGAACTGG
ATGAAGCAGA ATGTCGGTCC GGTACCAGGT ATCGGTCACA GGGTGAAGAG CGTCAAAAAT
CCGGATAAAC GGGTGAAATA TCTGGTTGAC TATGTTACAA ACCAGACGAC GCTTCACACT
CCTTGTCTTG ACTATGCACT TGAAGTCGAA AAGATCACCA CAGCCAAAAA GGATAACCTT
ATCCTGAACG TGGATGGTAC GATCGGTTGT ATTCTTGTTG ATCTTGATTT CCCGGAATAC
TCACTCAACG GCTTCTTTGT TCTGGCTCGG ACAATCGGCA TGATTGGTCA CTGGATCGAT
CAGAACAATC AGAATTCGCG CCTTATCAGG CTCTACGATT ATCTGATTAA TTATGCTGTA
AAAGAAGAAC GAGAAGTTCC CGAAAAGAAG TAA
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| Protein sequence | MSILANKDTR AVIIGGIAGL NAARRMAQFD FLINRPLTVQ AFVYPPEEGQ QKEIYRGGEL
NNVTVYSSLE KALEENPQIN TALIYIGASR AYQSAKEALD AKGIKLVTMI TEGVPEKDAK
RLRKHAIDSG KIFNGPSSIG IMSAGECRLG VIGGEFKNLK LCNLYRPGSF GVITKSGGLS
NEAMWLCAQN GNGITSAVAI GGDSYPGTDF VTYLNMFEND PDTKAVVIIG EVGGTLEEEA
AEWLGKEIRR IKLIASIGGT CQDVLPQGMK FGHAGAKEGK KGLGSARSKI NALREAGAVV
PDTFGGLSKA IKQVYLELKA SGVIKPEPEL DEKLLPQLPP SVQEVMKQGD IIVEPLIRTT
ISDDRGEEPR YVGYAASELC EKGYGIEDVI GLLWNKKLPS KEESEIIKRI IMISADHGPA
VSGAFGSIIA ACAGIDLPQA VSAGMTMIGP RFGGAVTNAG KYFKYGVKEY PNDIPGFLNW
MKQNVGPVPG IGHRVKSVKN PDKRVKYLVD YVTNQTTLHT PCLDYALEVE KITTAKKDNL
ILNVDGTIGC ILVDLDFPEY SLNGFFVLAR TIGMIGHWID QNNQNSRLIR LYDYLINYAV
KEEREVPEKK
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