| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1387 |
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| Symbol | |
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| ID | 6463629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1450406 |
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| End bp | 1451677 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727626 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_002018267 |
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| Protein GI | 194336473 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.77952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCCTG AGTTCTACAT TGCGCGGCGC TTTGCATTCA AACAGCGATC GGCAACGAAA
CCGACCTTCA TTGTCATGGT TGCCGTTATC GGCATCGCTG TGGGGACGGC AGCGCTTATT
CTGACACTCT CAATTGTGAA TGGATTCGCC AGCAGTGTGC AAAACAAGTT AATCAGTTTC
AGTTCTCACC TGCAGATCCG CCATCCCGAA GAGCAACTTT TTCAGGAGCG CCGCACCGAT
CTTGCAAAAA TTACAGGCCA TCCAAACATT GCAAGCGCGT CACCCTTTCT GGAAAAAAGT
TTTGTGCTCC GGAATCGCAC AACAGGAGGC ACTGAAAGCT GGCGAAGCAA ACCGGTTGTT
GTTAAAGGAG TGAGTGAAGA GCAAAAGAGC GTTTTTCTGA AAAAATTTCT TCGGGCGGGA
ACCCTCGACA GGCGAAATAA TGGCGAAGGT ATCGGACTCT ACGCAGGCCA GACACTGGCT
GAAAATCTTG ATCTCCGGGT CGGAAAAAAA GTGATGCTTG TCGGACTGGG AAGCAATGCC
TCAGGAGCAA AGCTTATTGC AGGCAACAAG AACATTGTGG ATATGCTCTC TTCTCTCGAC
CTTGAAGTCG GCGTGATACG AGGCATCTAC GACACTGGGC TTCAGGAGGG GTTTGATGAT
TTTGTCGTGA TTGCCGATCT CAAGGAGCTT CAGGAGCGCT TTAATCCGTT GATGATCAGT
GGCTATGATG CCAGTGTGCA CAACCTCAAT CAACTGCCGG AAACAGTGAA AGAGCTGCTC
AATCTCCTTG GGTTTCCCTT CTACGGCTAT ACGGTGTTTG AGCGCTATGC CAATCTCTTT
GAATGGCTGA AACTGCAGAA AAACATTACC CCCTTGCTGA TTATCACGAT CACCATTGTA
GCGGTTTTCA ACATCATCTC TACGCTTCTG GTGTTGATTA TTGAAAAGAC CCGCGAAATC
GGTATGCTCA GCGCACTCGG GCTTGAACCC GGAAAAATAA GCGCCGTTTT TATGGCGCAG
GCTTTTCTCG TCTCGCTTTC GGGAGTGATC ACTGGCAACA TTCTGGCCCT CTCGCTCACA
CTCTTCGAGC TGCGGTTTCA TCTCATTACC CTTCCCGAAA AAAGCTACTT CATCAAATAT
GTTCCACTGC TGATTGAGCC GGTCGACTAT GCCGTCGTCT CTGTTGCAGT GATGGCCCTT
ACCCTGCTTT TTGCCTTTAT TCCGGCACGG ATTGCTGCCT CACTGAAACC CGGTACCGCA
CTGGGGACTT AA
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| Protein sequence | MRPEFYIARR FAFKQRSATK PTFIVMVAVI GIAVGTAALI LTLSIVNGFA SSVQNKLISF
SSHLQIRHPE EQLFQERRTD LAKITGHPNI ASASPFLEKS FVLRNRTTGG TESWRSKPVV
VKGVSEEQKS VFLKKFLRAG TLDRRNNGEG IGLYAGQTLA ENLDLRVGKK VMLVGLGSNA
SGAKLIAGNK NIVDMLSSLD LEVGVIRGIY DTGLQEGFDD FVVIADLKEL QERFNPLMIS
GYDASVHNLN QLPETVKELL NLLGFPFYGY TVFERYANLF EWLKLQKNIT PLLIITITIV
AVFNIISTLL VLIIEKTREI GMLSALGLEP GKISAVFMAQ AFLVSLSGVI TGNILALSLT
LFELRFHLIT LPEKSYFIKY VPLLIEPVDY AVVSVAVMAL TLLFAFIPAR IAASLKPGTA
LGT
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