Gene Ppha_1367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1367 
Symbol 
ID6463668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1432357 
End bp1433739 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content50% 
IMG OID642727606 
Productargininosuccinate lyase 
Protein accessionYP_002018247 
Protein GI194336453 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCA AGAAAGAGTT ACTCTGGCAA AGCCGATTTT CACTACCCTT TGACCGCGAC 
GCGCTGTTGT TCTCTTCGTC GGTTCATGTT GATAAAAAGC TCTATCGTGA GGATATTCAG
GGCTCTATTG CTCATGTGAC CATGCTGGCC GAAGAGCATA TTGTCAGCGC TGAGGATGCA
ACCCAAATTA TTGCCGGACT CAGGGAGATT GAGGTGGAAC TTACCGATGG CACGCTTCTC
CCCCACTGGG AGGATGAGGA TATTCATACG GTGATCGAAA ACAGGCTGAA GGAAAAGGTC
GGAGCTGTTG CCGGTAAACT GCACTCCGGC AGAAGCCGTA ATGACCAGGT TGCAACCGAT
ACCCGTCTCT ATATGCGCCG TCAGATTACT GAACTGCAGG AGGCTCTGGG AGGTCTTTTG
AAGGTTCTTG TGGAGAAGGC GGAGAGCCAT CGAGAGACGA TCATCTTTGG GTATACCCAT
CTGCAGCGTG CCCAGCCTAT TTCCGCCGGC CATTACTACC TTGCATGGTT CAACATGTTT
TTGCGCGACC GTCAGCGCCT TATTGATCTC ATGAAAAGGG TCAATATCTC TCCTCTTGGC
GCAGCAGCCT TTGCTGGCAG TACGCTGCCG CTCAATGCTG AAAGAACGGC TGTTCTGCTT
GGTTTTGACG ATCTTTTTTC CAACAGTATT GATGCGGTCA GTGATCGTGA TATTGTCATC
GAGTTCATCT CCGACTGTTC GATGATCATG ATGCACCTCT CCCGGTTTGC CGAGGATCTG
ATTCTCTGGA GCTCTTACGA GTTTGGCTAT CTTGAGATCA GCGATGCCTT TGCGACCGGC
TCATCCATCA TGCCGCAGAA GAAGAATGCT GATATTGCCG AGCTGGTAAG GGGTAAAACA
GGAAGGGTGT ATGGTAATCT TATGGCTATG CTGACCATCA TGAAGGGGCT GCCTCTCTCC
TATAACCGCG ACATGCAGGA AGACAAGCAG CCGTTGTTTG ACAGCGCAGA GACGACGATC
GGGAGTGTCG CCATCTTTAC AAAACTGCTT GAGCATACCA AGCTGAAAGA GGAGCGATTG
GCAAAACTGA CGGCAGAGGA TCTCAGCCTT GCCACCGAGA TAGCGGAATA TCTTGTGCGC
CGTCAGATTC CTTTCCGCGA TGCGCACCGT ATTACCGGCA AAATCGTTAC CTGGAGCATC
GCTTCGAATG TGACCCTGCC AAATATCCCG GTAGAGAAGT TCCGGGAGTT TTGTGAGGTT
ATTGATCCGG ATATTTACGA CTCCCTCAAA GCGGATGTAA GTGTAAACTC CAAAAGAACA
CATGGGAGCT GCTCATTTGA CTCCGTAGCG CTCCAGATTG AGAAAGCCAG AAAAGAGCTT
TAA
 
Protein sequence
MSSKKELLWQ SRFSLPFDRD ALLFSSSVHV DKKLYREDIQ GSIAHVTMLA EEHIVSAEDA 
TQIIAGLREI EVELTDGTLL PHWEDEDIHT VIENRLKEKV GAVAGKLHSG RSRNDQVATD
TRLYMRRQIT ELQEALGGLL KVLVEKAESH RETIIFGYTH LQRAQPISAG HYYLAWFNMF
LRDRQRLIDL MKRVNISPLG AAAFAGSTLP LNAERTAVLL GFDDLFSNSI DAVSDRDIVI
EFISDCSMIM MHLSRFAEDL ILWSSYEFGY LEISDAFATG SSIMPQKKNA DIAELVRGKT
GRVYGNLMAM LTIMKGLPLS YNRDMQEDKQ PLFDSAETTI GSVAIFTKLL EHTKLKEERL
AKLTAEDLSL ATEIAEYLVR RQIPFRDAHR ITGKIVTWSI ASNVTLPNIP VEKFREFCEV
IDPDIYDSLK ADVSVNSKRT HGSCSFDSVA LQIEKARKEL