Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1366 |
Symbol | |
ID | 6463669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1430297 |
End bp | 1432360 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642727605 |
Product | carboxyl-terminal protease |
Protein accession | YP_002018246 |
Protein GI | 194336452 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGGAA AAAGTCTGTT TTGCTTTGTG GTTGCATTGG GAATTTCCTT GCAGCTTCGG GCTGCAAATC CTCAGGAGCG GGCTTCAGCC CAGACGGTTA CTCTTCTCAA ACCTACTGCT GAAGAGAAAG AGGCTGTCCG GGTTATCGGT CAATACCTTA TGCAGAAACA CTATAGAAAG GTACCTGTCA ACGATTCCCT TTCTCAGCAG ATCTTCAGCC GTTTTATTGA CAATCTTGAC GGCAGCAAAA GCTACTTTCT GGCAAGTGAT ATAGAGCGGC TCAGGAAGAG TTATGGCAAT ACGATTGATG ACGAATTTCT TGCTGGCAGT GCACATGCAG GCTTTGACAT CTATAACCTG TTTCTTCAGC GTTCAAAAGA GAAAATGCGT TATATGAAGG CATTAGCCGA TAAGGTGCAT CTCAATTTAT CCGTACCGGA AACCCTTGAT CTTGACCGCA AGAGTGATCC CTGGCCTCTT GACCGGAGCC AGCTTATCGC TCTGTGGAAC AAAGAGCTGA AATACCAGTG GCTCAATTTG AAATATTCAG GAGAGAGCAA CAAAAGCATT CGTGGAGAGC TGGCAAAAAA CTATACAAGC AGACTGAACA TTCTGAACCG CCTGAAGCCG GAAGATGCTT TTCAAGCCTA TACCTACGCT CTGACAACGT CATTTGATCC CCATACAAGC TATTTTTCAC CAGACGAGTA TCAGAATTTT CAGATCGACC TGAGCCGTTC ACTTGAGGGA ATCGGCGCCA AACTGCAGAC AGAAGGGGAG TATACGATTG TTCATGAACT CATTCCGGGG GGGCCGGCAT TCAAAAGCAA TACCCTGAAA AAAGGGGATA AAATTATCGG CGTCGGTCAG GGGAGAGCCC TTGCAATCGT TGATGTCTTC GGCTGGCGAA TCAATGATGT GGTAAAGTTG ATTCGGGGGA AAAAGGGCAC CATCGTTCGC CTGAAAATTC TTCCGGCCAG CCAGGGTGGG CGTGGGCCGG AAAAAATAGT CGAACTCCTG CGCGACAAAA TCAACTTGCA GGAACAGGCA GCAAAGAAAA GCATTATCAT ACAGAAATCG AAGAAAATCG GAGTCATTAC CATCCCCTCC TTTTATCTCG ATTTCGAAGG ACAGCAACAG AACGCCAGCG ATTACAACAG CACCAGTCGC GATGTCAGCC GTATTCTGAA CGAACTGAAT GCTGAGCATG TGGACGGCAT CGTTATTGAT CTTCGTGATA ATGGCGGTGG CTCGCTTGAA GAGTCTGTGA GTGTTACCGG ACTCTTTATT CCAGGCGGAC CGGTCGTTCA GATAAGCGAC GCTGCAGGTG GAAAAGTGGT ACTCAAGGAC GAAGACAGTC GGGTACAATA TAGTGGGCCA CTTGCCGTTC TCGTCAACCG TTACAGCGCC TCTGCATCCG AAATTTTCGC TGCGGCCATT CAGGATTACG GCCGCGGTGT GATCATTGGA GAGAGAACGT TCGGGAAAGG TACCGTTCAA AGCCTGATCA GACTTTCACG GCCAAACTCT TTTATTGGGA AGAAAACTGA ACTTGGAGAG ATAAAACTTA CCATGGCAAA GTTTTACCGG ATCTCTGGAG GCAGTACCCA GCACAAGGGT GTCGAGCCTG ATATTGCCAT GCCCTCCATG ATCGATATGG CAAAAATCGG CGAAGATACC TATACCAGCA GTTTGCCATG GAGCACCATC TCGCCATCAC TCTACAAACC CACCGCAGAG GTCAGTCCTG AAAAGATCAA TCTGCTCCGA CAAAATTTTC TGCAGCGCTC ATCGAAGAAT CCTCTCTATC AGAGTTATCT GCACGATATC GCTACCCTTG ACCAGATTCG CAAAAAAAAG GAGATATCGC TTCAGGACTC CGCCATCAAA TCAGAAACAG AGACCATTAA ACGGATTGAG AAGCAGTGGG TCAAGGAGCA GGATCCTGCA AAAGATCTCG ACAAGGATGC CGTGCTCAAC CAGTCAGCAG CAGTTGTTGG CGATCTGGCG GCAGAACTTG AGGCAGGGAA CCTGAAAGCA GGAACCCTGC CATCACCGCA TTAA
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Protein sequence | MLGKSLFCFV VALGISLQLR AANPQERASA QTVTLLKPTA EEKEAVRVIG QYLMQKHYRK VPVNDSLSQQ IFSRFIDNLD GSKSYFLASD IERLRKSYGN TIDDEFLAGS AHAGFDIYNL FLQRSKEKMR YMKALADKVH LNLSVPETLD LDRKSDPWPL DRSQLIALWN KELKYQWLNL KYSGESNKSI RGELAKNYTS RLNILNRLKP EDAFQAYTYA LTTSFDPHTS YFSPDEYQNF QIDLSRSLEG IGAKLQTEGE YTIVHELIPG GPAFKSNTLK KGDKIIGVGQ GRALAIVDVF GWRINDVVKL IRGKKGTIVR LKILPASQGG RGPEKIVELL RDKINLQEQA AKKSIIIQKS KKIGVITIPS FYLDFEGQQQ NASDYNSTSR DVSRILNELN AEHVDGIVID LRDNGGGSLE ESVSVTGLFI PGGPVVQISD AAGGKVVLKD EDSRVQYSGP LAVLVNRYSA SASEIFAAAI QDYGRGVIIG ERTFGKGTVQ SLIRLSRPNS FIGKKTELGE IKLTMAKFYR ISGGSTQHKG VEPDIAMPSM IDMAKIGEDT YTSSLPWSTI SPSLYKPTAE VSPEKINLLR QNFLQRSSKN PLYQSYLHDI ATLDQIRKKK EISLQDSAIK SETETIKRIE KQWVKEQDPA KDLDKDAVLN QSAAVVGDLA AELEAGNLKA GTLPSPH
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