Gene Ppha_1366 details

Gene Information

• Locus tag: Ppha_1366
• ID: 6463669
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 1430297
• End bp: 1432360
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642727605
• Product: carboxyl-terminal protease
• Protein accession: YP_002018246
• Protein GI: 194336452
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0793] Periplasmic protease
• TIGRFAM ID: [TIGR00225] C-terminal peptidase (prc)

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGGAA AAAGTCTGTT TTGCTTTGTG GTTGCATTGG GAATTTCCTT GCAGCTTCGG 
GCTGCAAATC CTCAGGAGCG GGCTTCAGCC CAGACGGTTA CTCTTCTCAA ACCTACTGCT 
GAAGAGAAAG AGGCTGTCCG GGTTATCGGT CAATACCTTA TGCAGAAACA CTATAGAAAG 
GTACCTGTCA ACGATTCCCT TTCTCAGCAG ATCTTCAGCC GTTTTATTGA CAATCTTGAC 
GGCAGCAAAA GCTACTTTCT GGCAAGTGAT ATAGAGCGGC TCAGGAAGAG TTATGGCAAT 
ACGATTGATG ACGAATTTCT TGCTGGCAGT GCACATGCAG GCTTTGACAT CTATAACCTG 
TTTCTTCAGC GTTCAAAAGA GAAAATGCGT TATATGAAGG CATTAGCCGA TAAGGTGCAT 
CTCAATTTAT CCGTACCGGA AACCCTTGAT CTTGACCGCA AGAGTGATCC CTGGCCTCTT 
GACCGGAGCC AGCTTATCGC TCTGTGGAAC AAAGAGCTGA AATACCAGTG GCTCAATTTG 
AAATATTCAG GAGAGAGCAA CAAAAGCATT CGTGGAGAGC TGGCAAAAAA CTATACAAGC 
AGACTGAACA TTCTGAACCG CCTGAAGCCG GAAGATGCTT TTCAAGCCTA TACCTACGCT 
CTGACAACGT CATTTGATCC CCATACAAGC TATTTTTCAC CAGACGAGTA TCAGAATTTT 
CAGATCGACC TGAGCCGTTC ACTTGAGGGA ATCGGCGCCA AACTGCAGAC AGAAGGGGAG 
TATACGATTG TTCATGAACT CATTCCGGGG GGGCCGGCAT TCAAAAGCAA TACCCTGAAA 
AAAGGGGATA AAATTATCGG CGTCGGTCAG GGGAGAGCCC TTGCAATCGT TGATGTCTTC 
GGCTGGCGAA TCAATGATGT GGTAAAGTTG ATTCGGGGGA AAAAGGGCAC CATCGTTCGC 
CTGAAAATTC TTCCGGCCAG CCAGGGTGGG CGTGGGCCGG AAAAAATAGT CGAACTCCTG 
CGCGACAAAA TCAACTTGCA GGAACAGGCA GCAAAGAAAA GCATTATCAT ACAGAAATCG 
AAGAAAATCG GAGTCATTAC CATCCCCTCC TTTTATCTCG ATTTCGAAGG ACAGCAACAG 
AACGCCAGCG ATTACAACAG CACCAGTCGC GATGTCAGCC GTATTCTGAA CGAACTGAAT 
GCTGAGCATG TGGACGGCAT CGTTATTGAT CTTCGTGATA ATGGCGGTGG CTCGCTTGAA 
GAGTCTGTGA GTGTTACCGG ACTCTTTATT CCAGGCGGAC CGGTCGTTCA GATAAGCGAC 
GCTGCAGGTG GAAAAGTGGT ACTCAAGGAC GAAGACAGTC GGGTACAATA TAGTGGGCCA 
CTTGCCGTTC TCGTCAACCG TTACAGCGCC TCTGCATCCG AAATTTTCGC TGCGGCCATT 
CAGGATTACG GCCGCGGTGT GATCATTGGA GAGAGAACGT TCGGGAAAGG TACCGTTCAA 
AGCCTGATCA GACTTTCACG GCCAAACTCT TTTATTGGGA AGAAAACTGA ACTTGGAGAG 
ATAAAACTTA CCATGGCAAA GTTTTACCGG ATCTCTGGAG GCAGTACCCA GCACAAGGGT 
GTCGAGCCTG ATATTGCCAT GCCCTCCATG ATCGATATGG CAAAAATCGG CGAAGATACC 
TATACCAGCA GTTTGCCATG GAGCACCATC TCGCCATCAC TCTACAAACC CACCGCAGAG 
GTCAGTCCTG AAAAGATCAA TCTGCTCCGA CAAAATTTTC TGCAGCGCTC ATCGAAGAAT 
CCTCTCTATC AGAGTTATCT GCACGATATC GCTACCCTTG ACCAGATTCG CAAAAAAAAG 
GAGATATCGC TTCAGGACTC CGCCATCAAA TCAGAAACAG AGACCATTAA ACGGATTGAG 
AAGCAGTGGG TCAAGGAGCA GGATCCTGCA AAAGATCTCG ACAAGGATGC CGTGCTCAAC 
CAGTCAGCAG CAGTTGTTGG CGATCTGGCG GCAGAACTTG AGGCAGGGAA CCTGAAAGCA 
GGAACCCTGC CATCACCGCA TTAA 

 

Protein sequence

MLGKSLFCFV VALGISLQLR AANPQERASA QTVTLLKPTA EEKEAVRVIG QYLMQKHYRK 
VPVNDSLSQQ IFSRFIDNLD GSKSYFLASD IERLRKSYGN TIDDEFLAGS AHAGFDIYNL 
FLQRSKEKMR YMKALADKVH LNLSVPETLD LDRKSDPWPL DRSQLIALWN KELKYQWLNL 
KYSGESNKSI RGELAKNYTS RLNILNRLKP EDAFQAYTYA LTTSFDPHTS YFSPDEYQNF 
QIDLSRSLEG IGAKLQTEGE YTIVHELIPG GPAFKSNTLK KGDKIIGVGQ GRALAIVDVF 
GWRINDVVKL IRGKKGTIVR LKILPASQGG RGPEKIVELL RDKINLQEQA AKKSIIIQKS 
KKIGVITIPS FYLDFEGQQQ NASDYNSTSR DVSRILNELN AEHVDGIVID LRDNGGGSLE 
ESVSVTGLFI PGGPVVQISD AAGGKVVLKD EDSRVQYSGP LAVLVNRYSA SASEIFAAAI 
QDYGRGVIIG ERTFGKGTVQ SLIRLSRPNS FIGKKTELGE IKLTMAKFYR ISGGSTQHKG 
VEPDIAMPSM IDMAKIGEDT YTSSLPWSTI SPSLYKPTAE VSPEKINLLR QNFLQRSSKN 
PLYQSYLHDI ATLDQIRKKK EISLQDSAIK SETETIKRIE KQWVKEQDPA KDLDKDAVLN 
QSAAVVGDLA AELEAGNLKA GTLPSPH