| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1351 |
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| Symbol | |
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| ID | 6461385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1415114 |
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| End bp | 1415962 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642727591 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002018232 |
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| Protein GI | 194336438 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AGAAGATGGT GGGCTCCCTC GGCGTTGTCA TTACGGGGGG GAGTAGAGGG
CTGGGATATG CTCTTGCTTT GGAATTTCTT GCAGCAGGTG ATCGCGTGGT CATTTGTGGC
AGGAACCCCG GGCGCCTCGA TGAAGCAATA CAGACTCTTC AGCAGGCAGT GCCATCTGGT
GAAGTATATG GTATTGTGTG TGATGCAGGA AATCCATCGG GTGGAAGGGA ACTTGCGGCT
TTTGCTGCCG AACGACTCGG AAGAGTTGAC CGATGGATCA ACAATGCCGG AACCGCCGGG
CTGTTCAAGC GCCCTTTATG GGAACTTCAT GCGGAGGATA TCCTGGAAAC CTGTACGACC
AACCTTTCAG GCTCTGTCAT GCTGTGTGCT GAAGCCGTTA GAGTGATGGA TCGCCAGCCC
CTCTCCCCTG AACCGGTGTA TCATATTTTT AATATGGGTT TTTCATCGAT CGGGGCAAAA
TTTTCGCGTT CAGCGCTGTC ACACAAGGCG TCAAAAAGAG GGGTGGCAGA ACTGACGCAT
TTTCTCTACA GAGAGTTGAA AGCTGCAGGA AAAACGAGTA TCGGTGTTCA TGAGGTGAGT
CCCGGTCTCG TGCTGACGGA CTTGCTGTTT CAAGATGCCA CGGAAGAGGC AATGAGGTTT
TTCTCTGTTA TCGCAGAACG AGCTGAAAAG GTTGCTTCCG TTTTGGTGCC GAAAATACGG
GAGATAACCA GACGCACAAG TCGTATAAGG TACCAGCCAC TTGTTATGAT GTTTTTCAGG
TTGCTCATTG GAATGAAAGT GGTTATCGGC AAACCAAAAG AGGTTGGTCG AGCCAAAGGG
CACTCCTGA
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| Protein sequence | MKKKKMVGSL GVVITGGSRG LGYALALEFL AAGDRVVICG RNPGRLDEAI QTLQQAVPSG
EVYGIVCDAG NPSGGRELAA FAAERLGRVD RWINNAGTAG LFKRPLWELH AEDILETCTT
NLSGSVMLCA EAVRVMDRQP LSPEPVYHIF NMGFSSIGAK FSRSALSHKA SKRGVAELTH
FLYRELKAAG KTSIGVHEVS PGLVLTDLLF QDATEEAMRF FSVIAERAEK VASVLVPKIR
EITRRTSRIR YQPLVMMFFR LLIGMKVVIG KPKEVGRAKG HS
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