Gene Ppha_1345 details

Gene Information

• Locus tag: Ppha_1345
• ID: 6461161
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 1409176
• End bp: 1409850
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642727585
• Product: hypothetical protein
• Protein accession: YP_002018226
• Protein GI: 194336432
• TIGRFAM ID: [TIGR02145] Fibrobacter succinogenes major paralogous domain

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAAGA AAAGAGTTTT TGTAAGCGCC GGGGTATTGC TTGGGATGCT TTTTTTTGCC 
AGTTGCACCA GTAAACCACA AAAGAGTACC GATATTGACG GAAACAGCTA CACGGTTATG 
AAGATGGGGT CAATGCACTG GACAGGAGAA AATCTTGATG TCGCACACTA TCGTAATGGC 
GATATCATAC CGGAAATAAA GGATCCCGCT GTGTGGACAA AACTGACAAC AGGAGCCTGG 
TGTTATAACG GGAATGATGC AGAAAATGGC AAAATTTATG GAAAGCTCTA TAACTGGTAT 
GCGGTCAATG ATCCGAGAGG TCTTGCCCCT GCGGGATGGC ATGTAGCCAC TGATGCCGAG 
TGGTCAGAGT TGGGAACTCT GCTTGGTGGA ACAGAAAAGG CCGGTGGAGC AATGAAGGCA 
ACCTCACACT GGAAAGAGCA GAGTGCCGGG TCGAACAAGA GCAGCGGATT TAACGCTCTT 
CCGGCCGGAG CACGCAGGGA CACCGATGGA GAGTTTATGG CGCCAGGAGG GTACAGTCGC 
TTCTGGTCAT CAACGGAGTT AACAGCAAAA ACAGTCAGGG TTAGCGCTAT TGGCTATTTT 
GACGCGGTTT TTCGGCAAGG CAAGGCTGGT AAAAATAATG CATTTTCGGT TCGCTGTGTA 
AAAGATAAGG ATTGA 

 

Protein sequence

MQKKRVFVSA GVLLGMLFFA SCTSKPQKST DIDGNSYTVM KMGSMHWTGE NLDVAHYRNG 
DIIPEIKDPA VWTKLTTGAW CYNGNDAENG KIYGKLYNWY AVNDPRGLAP AGWHVATDAE 
WSELGTLLGG TEKAGGAMKA TSHWKEQSAG SNKSSGFNAL PAGARRDTDG EFMAPGGYSR 
FWSSTELTAK TVRVSAIGYF DAVFRQGKAG KNNAFSVRCV KDKD