Gene Ppha_1343 details

Gene Information

• Locus tag: Ppha_1343
• ID: 6462301
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 1407924
• End bp: 1408397
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642727583
• Product: protein of unknown function DUF134
• Protein accession: YP_002018224
• Protein GI: 194336430
• COG category: [R] General function prediction only
• COG ID: [COG1342] Predicted DNA-binding proteins

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACCA ATCGGGTCGG GCGTCCGACT CATTGCCGAA GCATTCAGGA TATGCCCCGG 
ATAACCTGTT TTAAACCGGA AGGGGTTCCT CCTGAAGAAC TGCAAAGTAT TGTATTGACG 
CTTGATGAGC TGGAGGCTAT ACGATTGGCT GATAAAGAGG GGTTATACCA GGCTGATGCG 
GCAATAAGGA TGCAGGTATC TCGTCCAACT TTTGGCCGTA TTCTTGAGGC GGCCCATAAA 
AAAGTTGCAG AGGCAATTGT TGACGGCAAA AAACTCTGTA TTCAGGGTGG TACGTTTCGC 
TCCCTTTGCG ACTCGACCCT TACTGACCGT CCAAATATTT GTGAATGTCC CGAATGCGGT 
CTCAAGCTTC CGCATCAGAA GGGAGAGCCT TGCAGGGAAA CAGTTTGTCC TCATTGCCAA 
GCCCCCCTGA AGCGCATGGG AGGGTGTCTT CCCGAATTTC TCCCTCAGGT ATGA 

 

Protein sequence

MKTNRVGRPT HCRSIQDMPR ITCFKPEGVP PEELQSIVLT LDELEAIRLA DKEGLYQADA 
AIRMQVSRPT FGRILEAAHK KVAEAIVDGK KLCIQGGTFR SLCDSTLTDR PNICECPECG 
LKLPHQKGEP CRETVCPHCQ APLKRMGGCL PEFLPQV