Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1327 |
Symbol | |
ID | 6461698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1392749 |
End bp | 1393951 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642727568 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002018209 |
Protein GI | 194336415 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.674334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATATCTC TTGCCGGACG CGATATTCTG CATGGATGGG GCCGTTTTCT TTTGACTGGT GTTGGCCTTG GTCTGCTGAT TGGAGTGACA CTGAGTATGG CTGGTATCTA TCGGGGAATG GTTGATGATG CCAACGTCCT GATTGAGAGC AGTGGAGCTG ATCTCTGGGT TGTGCAGCAA GGGACGCTTG GGCCTTATGC CGAACCATCA AGTATTTATG AGGATACCTA CCGGAGTATT CTCGGAATGC AGGGGGTCGC CAGGGCGTCA AATGTGACCT ACCTCACCAT GCAGGTGCGC CATGCTGACA GTGATGTCCG GGCAATGGTG GTCGGTATTG TTCCAGGCGG AGCGGGCGAA CCAGGCCAGC CCGGCTTTCT CGTCGCCGGT CATCACCTTA CCGGAAGCCG CTATGAGGCG GTTGCGGATG TTAAGGCTGG ATTTTCCCTT GGTGATACCA TTACTATTCG CCGTAACCGC TATCGGGTTG TTGGGCTTAC CCGACGTATG GTTTCATCGG GCGGTGACCC GATGGTTTTT ATTCCATTAA AAGAGGCGCA GCAGGCACAG TTTCTCAAGG ATAATGATGC ACTTCTTCAG CAGCGACGAC GTACGGAAGC CAATCCTCTC TTTAACCGTC CCGCAGTACC GGGGCTGCTT GAGGCTGTTA TTGCCTCTCA GACAACCAAT AGTTACGTCA ACGCTGTTCT GGTACAGTTG AAACCTGAAT ATGATCCTGA AATCACGGCT AAAAATATTC AGCGATGGAA ACGGTTGCAG GTCTATACCC GGTCACAGAT GAGGACTATT CTTGTTGATA AACTTATTGC GACATCAGCC AAACAGATCG GGATGTTTCT GGTCATTCTC TCCATAGTAA GCGCTGCTAT TGTAGCATTT ATTATCTACA CCATGACGAT GGCCAAGATC AGGGAGATTG CGGTTCTGAA GTTGATCGGG ACAAGAAACA GGGTGATTGC AAGCATGATC CTTCAGCAGG CATTGGGGCT CGGAGCAATT GGCTTTGTCG TTGGCAAAAT AGCCGCAACA CTCTGGTCTC CTTTTTTTCC AAGATATGTT CTTCTTGAAC CAGGTGATGC CATAAGAGGC TTTATCGCTG TCATGGTGAT CTCTGTTCTG GCAAGTATAC TGGCCATTAC AGCAGCTCTC AGGGTTGATC CTGCTGAAGC TATAGGAGGT TGA
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Protein sequence | MISLAGRDIL HGWGRFLLTG VGLGLLIGVT LSMAGIYRGM VDDANVLIES SGADLWVVQQ GTLGPYAEPS SIYEDTYRSI LGMQGVARAS NVTYLTMQVR HADSDVRAMV VGIVPGGAGE PGQPGFLVAG HHLTGSRYEA VADVKAGFSL GDTITIRRNR YRVVGLTRRM VSSGGDPMVF IPLKEAQQAQ FLKDNDALLQ QRRRTEANPL FNRPAVPGLL EAVIASQTTN SYVNAVLVQL KPEYDPEITA KNIQRWKRLQ VYTRSQMRTI LVDKLIATSA KQIGMFLVIL SIVSAAIVAF IIYTMTMAKI REIAVLKLIG TRNRVIASMI LQQALGLGAI GFVVGKIAAT LWSPFFPRYV LLEPGDAIRG FIAVMVISVL ASILAITAAL RVDPAEAIGG
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