| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1326 |
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| Symbol | |
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| ID | 6462601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1391556 |
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| End bp | 1392752 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642727567 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002018208 |
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| Protein GI | 194336414 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0997151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA AGACAATCAA TAAAAAAATG GTGGGATTGC TTGCCGTTCT GGCACCTCTT
CTCCTGCTTT TTGTCTATGT GGCATTGCGC TCGGGTCCTC TTGCTCCCGT GCCGGTAACG
GTTATCACTG TTGAAACAAA ACAGATTCGC CCCGTGTTGT TTGGTATTGG TACTCTTGAG
GCAAGATATG CGTATCGGAT CGGCTCTGTA GCTGCGGGCA GGATCAAGCT CATTAATGTT
GAAGTGGGAG ATGTTGTTCG CGCCGGTCAG GTCATAGGGG AGATAGATCC GGTTGATCTC
GATGAGCGTT TGAGCGCTCA ACTCTCCCTT ATCAAACGGG CAGAGGCCCA GATAAAATCT
GCCGAGGCAC AGCTTCGCGA TGCCGATACA AGGAAAGAGT TTGCCAGTGG ACAGGAAAAA
CGTTACGGTT TGCTCCTTTC TGCTCGTGCT GTGAGTGCAG AGTCGGCTGA AGCGAAGCAT
CAGGAGGCAG AGATTGCCCG AGCATCTGTT TCAGGCGCTG AGGCTGGTGT CCATGCGGCA
CGTCAAGAGC TCGCTTCACT CAAGGCAGAA TATCAGGGAT TGGTGAAGCA ACGTCATAAT
TTGCTGCTCA TAGCGCCGGT TGATGGTCTG GTAACAGCCC GTGATGCAGA GCCGGGGAAT
ACGGTGTTAT CCGGTCAGAC CATCATCGAG ATGATTAATC CGCGAAGCCT CTGGATTGAT
GTGCGTTTCG ATCAATTGCA GAGCGCAGGC CTGAAAGCGG CTCTTCCTGC ACGGATAACA
CTTCGTTCTC AACCGGGTCA TATTTTTTCC GGTTTTGTCG AGAGGGTTGA GCCCCTCGCT
GACCGGATAA CAGAGGAGCT TCTCGCAAAA GTTCTCTTTA CTGTTTTACC CGATCCACTG
CCACCGGTTG GCGAACTCTG TGAGGTTACG GTTTTGCTTC CTCCTTTGCC AGAACTTCCC
GTTGTCCCCA ACGCAAGTGT ACATCGAGTT GATGGCCGTC TTGGTGTATG GGTTGTTGAG
GGTTCCAGGC TTCATTTTGC CGAGGTTCGC ACCGGCATGG CTGACCGTGA TGGTAATCTG
CAGATTCTTG GAGGATTAAA AGCTGGAGCA AGAGTGGTGG TGTACAGTAA AAGCGTTTTG
CATGCTGGAA GCCGCATTTC GATTCTTGAT CGAAAGAGAA AGGATGGTAC CCTGTGA
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| Protein sequence | MKIKTINKKM VGLLAVLAPL LLLFVYVALR SGPLAPVPVT VITVETKQIR PVLFGIGTLE
ARYAYRIGSV AAGRIKLINV EVGDVVRAGQ VIGEIDPVDL DERLSAQLSL IKRAEAQIKS
AEAQLRDADT RKEFASGQEK RYGLLLSARA VSAESAEAKH QEAEIARASV SGAEAGVHAA
RQELASLKAE YQGLVKQRHN LLLIAPVDGL VTARDAEPGN TVLSGQTIIE MINPRSLWID
VRFDQLQSAG LKAALPARIT LRSQPGHIFS GFVERVEPLA DRITEELLAK VLFTVLPDPL
PPVGELCEVT VLLPPLPELP VVPNASVHRV DGRLGVWVVE GSRLHFAEVR TGMADRDGNL
QILGGLKAGA RVVVYSKSVL HAGSRISILD RKRKDGTL
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