Gene Ppha_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1325 
Symbol 
ID6461942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp1390948 
End bp1391559 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content44% 
IMG OID642727566 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002018207 
Protein GI194336413 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.161657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAG CGATAAAAAA TCTTTCGGCT GAGAAAAGGC GGTTGGTTAC GGTTGAGGCG 
GTTATTCAAC TTGCTGCTGA AAAAAACCCG GAACATATTA CGACGTTGCA GATTGCAGAA 
AGGATGAATT TGACGCAAGG CGCCTTGTTC CGCCATTTTC CAACCAAGAA TGCGTTATGG 
CAGTCGGTGA TGGAGTGGCT TGCCAGTCAG TTGCTTGGAA GGATTGACAG GGTTATTGAA 
AATATTGAAT CGGCCATAGA GGCTCTTGAA CTTATGTTCA TGACCCATCT TGATTTTGTT 
GTACAGCATC CGGGTGTGCC AAGAATGATC TTTGCTGAAC TGCAGCGACC GGATAAATCG 
TCGGCAAAAA AAATTGTAGA AACCATGCTG GCGAGTTATA GTGGGCGCCT TGAAAAACTC 
TTTAAAAAAG GAATTGCTCA GGGAAAAATT CACCCTGGCC TTGATGTGTC ATCAGCATCC 
GTACTGTTTA TAGGGATAGT TCAGGGCTTG GTGATGCAGT CACTTATAGC GGGAGACACA 
TCAAAGATGC TCAGCAACGC CAAACCTGTG TTTGCTCTTT TCCTGCAGGC AATAAAAAAG 
AGAGAACAAT GA
 
Protein sequence
MKRAIKNLSA EKRRLVTVEA VIQLAAEKNP EHITTLQIAE RMNLTQGALF RHFPTKNALW 
QSVMEWLASQ LLGRIDRVIE NIESAIEALE LMFMTHLDFV VQHPGVPRMI FAELQRPDKS 
SAKKIVETML ASYSGRLEKL FKKGIAQGKI HPGLDVSSAS VLFIGIVQGL VMQSLIAGDT 
SKMLSNAKPV FALFLQAIKK REQ