| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1318 |
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| Symbol | |
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| ID | 6462448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1384254 |
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| End bp | 1386296 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642727559 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002018200 |
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| Protein GI | 194336406 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAC AGGAGCTTCG AGGAAAATGG CCGTTGGTGA TTCCGTCGAA GTATTTTGCC
GGATTGTTTC TCTTTCTGGT GGCGCTTTTT TTTGGTACGA CCCTTTTTGA ATATCAATAT
CGGAAATCGG AAATTGAGCA TATCATGCGT GAAGAGGCTA CCTTGCTTAT TCACGCATTG
AACGAAGGTG CTGAAAATGC TATTACAGGC TACAATGAGA ATAGCTCGCT GCTTACCGGG
AGCCTTATGA GCCAGTTGAG GCTTCTTGAT CGTATTGATA AAAAAACAGC TCTGACCTCT
GCAGATTTGA CTGAAATTGC CGGATCGGGA GGAATCTATC GCATCAATAT TTTTGATCGT
AACGGAAAGA GGATTGCTTT CAATACTCCG CCCGATCATG ATCCGCTGGC CCAGCAGTGT
GATCCGAAAC TGGAGTTACA ACCGATTTTT TCACGGCAGA CAGACTCTCT TGTTGTCGGC
ATCAGAGAGA GTTCTTCCAA AAGAGGGGCA CGGCTGGTTG TTGCTGTTGC CCGGAGCCGG
GGTGGTGCGA TTACCGGAAA TATTGATGCG TCAAGGTTAA TCAATCTTCG TCGTCAACTT
GGGGTTGGAC GACTTATTCA GCGCATTGGG GCTGATACAA CGGGTATTGA TTATATCATC
TGGCAGGATA CGACGGCCAT TCTGGCTGCT ACACCAAATG TTACCGGAGC AGAGCCTCTT
CTCTCGGATA CGGTTCTGGC AAAGGCTCTT TTACAGAAAA AGCCAACAAC CCGATTTACA
ATATTTGACG GGCGCAAGGT TTTTGAAGTC GTTAAACCAT TTTTTTATCA GGATATCAAT
GTTGGGTTAC TTCGCATTGG TCTCAAAACT GATCATTTTA CCATTGCCCT GACAAAGCTG
CGCACCCGCT TTATCATGCT TGCCTTTCTC TTCTGTTTCG CTGCTCTCGT TATGCTGAAT
CTGGTGATGA CCCGCAGGAG TGAGCTTCGT ATGGCACAAG CTTATCAGCG TGCGCAGACT
TTTTCGTCAA CCATACTGGA GAGTATGGCA GATGCTGTTG TAGCGGTCAA TGCAGATTGT
TCTATCACTC TTGTGAATGG GGCTTCGGAA AGGCTTTTTG CTCTCTCCTC CCTCAATGCC
CTCAACACAC CGGTGGCGCA AATACTGCCA GAATGCGCGG AGTTTTTCTC AATCATCATG
GCTGAAAAAA GAGTATCGCT CCACAGGGAA CTTGAGTGTA TCGTTGGAGG CAAAACCCTC
TTTCTTGCTG GTAATTTCAC GCTTATTACA GGCGTTGACC GCTCTGTTGA AGGAGCCCTT
GGCGTTTTTC GGGATCTGAG CGAACAGCGA TCGATGCAGC GAATCATCAA TCGTCAGGAA
AAGCTCAGTG CAATGGGTGA GCTTGCATCC GGAGTTGCCC ATGAAATCCG AAACCCTCTT
AATGCCATAG GGATTCTTGC GCAGCGGCTT GCTATAGAGT TTTCACCGAC GGCGGATGAA
GAGGAATACC GCCAGCTTGT TCGTGCCGTG GTCTCCGAGG TGTATCGCGT CAATGCCATT
ATCCAGCGAT TTTTGAAATT TGCCCGTCCC TCAAAACTCA TTATGATCAA GAGTGATCTG
GATGAGTTTA TGCTCTCCTA TCGTCATCTT CTTCAGGGGG AAGCTGATGC AAAAGGGATC
AGATTCTCCC TGAACACCGA TAGTGGAGCA ATGGTAAACA TTGATCATGA ACAGATGCGG
CAGGCGCTGC TCAATCTTGT ACAAAATGCG GTTGAAGCCA CAGAGGAAGG GGGAGAGATT
ACGGTTTCTC TTTTCTGCCG TGAAAACCAG GCGCTTATTG AGATTGTCGA TACTGGCAGA
GGAATTCCGG AAAAAGAGAG AGCCCGGATC TTCAACCTCT ATTTCACGAC AAAGGATGAA
GGGACGGGTA TGGGGCTGAG TATTGCAAAT CAGATTATTC AGTCACATGG CGGTATTATT
GAAATTGAGA GTGAAGAGCA TCAGGGGAGC TGCTTCAGGA TCAAACTGCC TCTGGCGGAA
TAG
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| Protein sequence | MKKQELRGKW PLVIPSKYFA GLFLFLVALF FGTTLFEYQY RKSEIEHIMR EEATLLIHAL
NEGAENAITG YNENSSLLTG SLMSQLRLLD RIDKKTALTS ADLTEIAGSG GIYRINIFDR
NGKRIAFNTP PDHDPLAQQC DPKLELQPIF SRQTDSLVVG IRESSSKRGA RLVVAVARSR
GGAITGNIDA SRLINLRRQL GVGRLIQRIG ADTTGIDYII WQDTTAILAA TPNVTGAEPL
LSDTVLAKAL LQKKPTTRFT IFDGRKVFEV VKPFFYQDIN VGLLRIGLKT DHFTIALTKL
RTRFIMLAFL FCFAALVMLN LVMTRRSELR MAQAYQRAQT FSSTILESMA DAVVAVNADC
SITLVNGASE RLFALSSLNA LNTPVAQILP ECAEFFSIIM AEKRVSLHRE LECIVGGKTL
FLAGNFTLIT GVDRSVEGAL GVFRDLSEQR SMQRIINRQE KLSAMGELAS GVAHEIRNPL
NAIGILAQRL AIEFSPTADE EEYRQLVRAV VSEVYRVNAI IQRFLKFARP SKLIMIKSDL
DEFMLSYRHL LQGEADAKGI RFSLNTDSGA MVNIDHEQMR QALLNLVQNA VEATEEGGEI
TVSLFCRENQ ALIEIVDTGR GIPEKERARI FNLYFTTKDE GTGMGLSIAN QIIQSHGGII
EIESEEHQGS CFRIKLPLAE
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