| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1309 |
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| Symbol | |
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| ID | 6461832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1371465 |
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| End bp | 1373051 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642727550 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_002018191 |
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| Protein GI | 194336397 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.303647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCCTG TTGTAACTGT ACAGGAAATG CAAAAGGCCG ACAAGGCTGC CATTGAACTG
CTCCATATCG GCGAAACCCG CCTTATGGAG CTTGCCGGTC GTGAATGCCT TCGCGTGATC
AAAGAGAGCC TCAAAAGAGA CTCTTTTTCA GGATGCTCTT TTCTTCTGGT CTGCGGCAAA
GGCAACAATG GAGGTGACGG CTTTGTGCTG GCCCGCCATC TCCTCAATCT GGAAGCCTCG
GTCGATCTTC TTTTCCTCTA CCCCGAATCG CTGCTGCAAG GGGTCAATCG TCAAGGGCTC
ACCACACTGC AAGCCTACGG TGAACATGAT GCCCCCTTGC GCATTTTCGA AAGCCATGAC
GAGGCGCTGC CCTTCGTTGC CGAAACGCAT TACAATATCA TCATCGATGC CATTACAGGC
ACCGGCCTGC GACTGAACAA ACCGGGAATG GCGCTTGCGT CTCCCCTCTC TGAAGGCATT
GAGCTGATCA ACACCATCCG CGACCAAACA GGAGCCCTTA CCCTTGCCAT TGATGTTCCA
TCAGGACTCG ATGCAACCAC AGGCCTCTCT GCCACACCGG TAGTCATGGC GGATATCACC
GTCACAATGG CATACCCGAA AAGAGGATTC TATCTGAACG AAGGGCCGGA GTGCTGCGGA
GAGCTGCAGA TAGCGGAAAT CTCCATCCCC CGCTTTCTCG TTGAGCCCTC CTCCTACCTT
CTTGTCGACC AGGAGTTTGC GGCTAAACAG TTTATCCTGA GAGAAGCGTC GAGCGCAAAG
CATACGAACG GCAAGGTACT GATCATTGCC GGATCACAAA CCGCACAAAG CTCGATGCTT
GGGGCGGCCA TCCTCTCCGC GAAAGCCGCA CTGAAAAGCG GTGCAGGGTA TGTTTGTCTC
TCCCTCCCGA TCTCTTTGGC CGGTGCAATG CACACCGCCA TACCGGAAGC AGTTATTATT
GGAAGAGATA TTGCCACCAT TACCGAAAAA GCACACTGGG CCGATACAAT CCTGATCGGA
TGCGGCCTCG GACGCGATCA GGAAGCCATT GAGCTGGTCA GAGAACTGCT CGCGTCTTCC
ATCGTCACCT CAAAAAAAGT GATCCTTGAC GCTGATGCCC TCTACGCCCT CCCGGTTATC
GGAATAGCAG AGGCGTTGGG CAAATGCCGC GAGGTGCTGC TCACACCGCA TTACGGAGAG
TTCAGCCGCC TCTCGACATT ACCAATTGAA GAAATAGCAT CCGACCCGAT TGAATGCGCC
AGAAACTTTG CCACTCTCCA CGGAGTGAGC GTTCTTCTGA AAGGAAATCC CACAATTATT
GCAGAAGCTG AAGGGCCCGT TCTTCTCAAC ACCAGCGGTA CCGAAGCGCT TGCAACTGCC
GGTTCAGGCG ATGTCCTCTC CGGCATGATT GCCGCGCTTT CAGCCAAAGG AGCATCCCTT
TCAGATGCAG CAGCATCAGC CGCATGGTTT CACGGCAGGG CCGGAGACCT CGCCAGCGAC
GTCGCAAGCC TGGTCTCCTC CGGCATGGTT GTTGACACCA TCCAGCAGGC AATACAGGAA
ATTTTCGAGG TATCACATTT GTCGTAA
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| Protein sequence | MQPVVTVQEM QKADKAAIEL LHIGETRLME LAGRECLRVI KESLKRDSFS GCSFLLVCGK
GNNGGDGFVL ARHLLNLEAS VDLLFLYPES LLQGVNRQGL TTLQAYGEHD APLRIFESHD
EALPFVAETH YNIIIDAITG TGLRLNKPGM ALASPLSEGI ELINTIRDQT GALTLAIDVP
SGLDATTGLS ATPVVMADIT VTMAYPKRGF YLNEGPECCG ELQIAEISIP RFLVEPSSYL
LVDQEFAAKQ FILREASSAK HTNGKVLIIA GSQTAQSSML GAAILSAKAA LKSGAGYVCL
SLPISLAGAM HTAIPEAVII GRDIATITEK AHWADTILIG CGLGRDQEAI ELVRELLASS
IVTSKKVILD ADALYALPVI GIAEALGKCR EVLLTPHYGE FSRLSTLPIE EIASDPIECA
RNFATLHGVS VLLKGNPTII AEAEGPVLLN TSGTEALATA GSGDVLSGMI AALSAKGASL
SDAAASAAWF HGRAGDLASD VASLVSSGMV VDTIQQAIQE IFEVSHLS
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