Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1280 |
Symbol | |
ID | 6463707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1338054 |
End bp | 1340417 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642727521 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002018162 |
Protein GI | 194336368 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.134975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAC TTCAGAGAAA GCTACTGCGC GAACTGATGC GCCTCAAGGG TCAGATGCTT GCTGTTGCGG CGGTGGTGGC CTGCGGTATT TCGGTTTTTG TCTCCATGAG CAGCGTGAAG CATTCACTTG AGGTTTCGCG GCAGCGCTAT TACAACAGCT ATCGCTTTGC GGATGTTTTT GTGCAGGTGA AGCGTGCACC GGAGTTTTAC CGCGAAACGG TGAGTCGTAT TCCGGGGGTG GCATCGGTCA GCACTCGCAT TACGGCTGAC GTTACCCTCG ATGTTCCGGG GCTGGACGAA CCGGCTACAG CCCGGCTGGT TTCGATTCCC GACTATCGTA CGCCGATGCT GAATGATCTT TTTCTGAAAA AAGGGCGCTA TATCGAGCCG GGCAAACCTG ATGAGGTGAT TGCGAGCAAG CCCTTTCTCG AAGCTAACCA CCTTGTTCCC GGCGACCGGA TCAGTGCGGT GATTAACGGT CGAAAGCGGA GTCTGCTGAT TGTCGGCATG GGGCTCTCAC CCGAATATAT CTATGAGGTG CAGCCCGGCT CCTTTTTCCC CGACAAGCGG CGTTTCGGGA TTTTCTGGAT GGGGCGTCGC TCGCTGGAGT CTGCGCTCGA CATGAGCGGA GCGTTCAACG ACCTTTCGCT GACGCTTGCT CATGGGGCAT CGGAAAAAGA TGTCATCATG CGTCTCGACA CTCTCTTTAA ACGCTATGGT TCGCTTGGTG CCTATGGACG CAGCGAGCAG CTTTCCGATC GATTCATTGT CGATGAGATC AAGCAGGTCG GCATTCAGAT TACCTTTCTT CCGGTTGTCT TTCTCGCTGT GGCAGTTTTT CTGCTCAATA TTGTGCTTCG CCGTATTGTT GCCACCCAGC GCGACCAGAT TGCCGTGCTC AAGGCTATCG GCTACTCCAA TGAGGATGTC GGGTTGCACT ATCTGGGGTT TGCCATGATT CCTACCGCTT TTGGGGCGGT TGTGGGTACG CTGTTTGGAG CGTGGCTTGG CAGGGGGCTG ATGAACATCT ATGCCGATTT CTATAATTTT GCGGAGCTGG TCTATTACTT CCGTTTCGAG GATGTTGCCC TCTCGGTTCT TTTGAGTTTT GCTGCAGCCA TTTTTGGCGC GCTTGGTGCG GTGCGCAAGG CGGTGCAGCT TCCTCCGGCT GAGGCGATGC GCCCGGACTC CCCGGTGCTC TACAAGCCGG GTATATTTGA TCGAGAGTCG TTGCGAAAAA AAATTCCGGT ATCACTGCGG ATTATTGTGC GTAACCTGGA GCGCCGCCCC TGGAAAGCCG TGCTTTCTGT GCTGATGACC TCCCTTTCTG TCGCGATTCT CATTGCCGGT CGCTATACCT ATGACTCTCT TGACCGGATG ATTCAGGTGG AGTTTACCCG CAAACATCGC GAGGATGTTA CCGTGATTTT CAATAATCCC ATGCCTCCTT CGGTACGCTA TACCATTGCG TCGCTTGACG GTGTGCTTGA ACATGAATAT TATCGTGAAG AGCCGGTGAA GATGCGTTTC GGTCATCGTA TCCGTCGGCA GTCGATCAAG GGAATGGAGT CTGCCGAGGG GTTGCAGCGG CTGGTTGACA AGGCAAACCG ACAGTGCAGC TTGCCTCCTG ACGGCATTGT GCTGACCTCA ACGCTTGCGA CGCTTCTTGG TGTTGGGCCG GGCGACAAGC TGCAGATCGA GTTTCTGCAG GGCAGGCAGC GTCATGCCGA GCTTCTTGTC AGTGGAACCA TTGATGAAAT TCTTGGCCTC TCGGCCTACA TGAACCTTGG TGCGCTGAAC CGTCTGGCAG GCGATGGCGG GGCTCTGAAT GCGGCATATC TGCGTCTTGA TCAGGCAAAG GCCGGGAAGC TCTACACAAC CTTCAAGGGT ATGCCGGGAG TTTCCGGCAT CATGATGCTG AAGGCGATGA AGGAGAGTTT TGATGAGCTG ATTGCCCAGA GTATGAACAC CTCGACCGTC ATTCTCACCT CTTTTGCCTG TGTGCTTGCC TTTGCGGTGG TTTACAATGG CGCCCGCATC TCGCTTTCCG AGCGGGCACG AGAACTGACA AGCCTCCGGG TGCTCGGTAT GACAAAAGGG GAAATTTCCT TTATTTTGCT TGGTGAACAG GCTCTGCTTA CCAGTGCTGC CGTACCGCTT GGCTTTTTGA TTGGTATCGG GCTCTCTGCA CTGCTCGCCC ATGCGCTCAG TTCAGAACTC TATCGGCTCC CTTTGGTGTT CAGCGCCTTT AACTTTCTCT TTGCCTTTAT GGTTATTGTT CTTGTCTCGG TTGTCTCCGC TCTCCTGGTC AGAAAGCGGC TTACGGAGCT TGATCTTGTC GAGGTTTTAA AAACAAGGGA ATAG
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Protein sequence | MKQLQRKLLR ELMRLKGQML AVAAVVACGI SVFVSMSSVK HSLEVSRQRY YNSYRFADVF VQVKRAPEFY RETVSRIPGV ASVSTRITAD VTLDVPGLDE PATARLVSIP DYRTPMLNDL FLKKGRYIEP GKPDEVIASK PFLEANHLVP GDRISAVING RKRSLLIVGM GLSPEYIYEV QPGSFFPDKR RFGIFWMGRR SLESALDMSG AFNDLSLTLA HGASEKDVIM RLDTLFKRYG SLGAYGRSEQ LSDRFIVDEI KQVGIQITFL PVVFLAVAVF LLNIVLRRIV ATQRDQIAVL KAIGYSNEDV GLHYLGFAMI PTAFGAVVGT LFGAWLGRGL MNIYADFYNF AELVYYFRFE DVALSVLLSF AAAIFGALGA VRKAVQLPPA EAMRPDSPVL YKPGIFDRES LRKKIPVSLR IIVRNLERRP WKAVLSVLMT SLSVAILIAG RYTYDSLDRM IQVEFTRKHR EDVTVIFNNP MPPSVRYTIA SLDGVLEHEY YREEPVKMRF GHRIRRQSIK GMESAEGLQR LVDKANRQCS LPPDGIVLTS TLATLLGVGP GDKLQIEFLQ GRQRHAELLV SGTIDEILGL SAYMNLGALN RLAGDGGALN AAYLRLDQAK AGKLYTTFKG MPGVSGIMML KAMKESFDEL IAQSMNTSTV ILTSFACVLA FAVVYNGARI SLSERARELT SLRVLGMTKG EISFILLGEQ ALLTSAAVPL GFLIGIGLSA LLAHALSSEL YRLPLVFSAF NFLFAFMVIV LVSVVSALLV RKRLTELDLV EVLKTRE
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