Gene Ppha_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1280 
Symbol 
ID6463707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1338054 
End bp1340417 
Gene Length2364 bp 
Protein Length787 aa 
Translation table11 
GC content54% 
IMG OID642727521 
Productprotein of unknown function DUF214 
Protein accessionYP_002018162 
Protein GI194336368 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.134975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAC TTCAGAGAAA GCTACTGCGC GAACTGATGC GCCTCAAGGG TCAGATGCTT 
GCTGTTGCGG CGGTGGTGGC CTGCGGTATT TCGGTTTTTG TCTCCATGAG CAGCGTGAAG
CATTCACTTG AGGTTTCGCG GCAGCGCTAT TACAACAGCT ATCGCTTTGC GGATGTTTTT
GTGCAGGTGA AGCGTGCACC GGAGTTTTAC CGCGAAACGG TGAGTCGTAT TCCGGGGGTG
GCATCGGTCA GCACTCGCAT TACGGCTGAC GTTACCCTCG ATGTTCCGGG GCTGGACGAA
CCGGCTACAG CCCGGCTGGT TTCGATTCCC GACTATCGTA CGCCGATGCT GAATGATCTT
TTTCTGAAAA AAGGGCGCTA TATCGAGCCG GGCAAACCTG ATGAGGTGAT TGCGAGCAAG
CCCTTTCTCG AAGCTAACCA CCTTGTTCCC GGCGACCGGA TCAGTGCGGT GATTAACGGT
CGAAAGCGGA GTCTGCTGAT TGTCGGCATG GGGCTCTCAC CCGAATATAT CTATGAGGTG
CAGCCCGGCT CCTTTTTCCC CGACAAGCGG CGTTTCGGGA TTTTCTGGAT GGGGCGTCGC
TCGCTGGAGT CTGCGCTCGA CATGAGCGGA GCGTTCAACG ACCTTTCGCT GACGCTTGCT
CATGGGGCAT CGGAAAAAGA TGTCATCATG CGTCTCGACA CTCTCTTTAA ACGCTATGGT
TCGCTTGGTG CCTATGGACG CAGCGAGCAG CTTTCCGATC GATTCATTGT CGATGAGATC
AAGCAGGTCG GCATTCAGAT TACCTTTCTT CCGGTTGTCT TTCTCGCTGT GGCAGTTTTT
CTGCTCAATA TTGTGCTTCG CCGTATTGTT GCCACCCAGC GCGACCAGAT TGCCGTGCTC
AAGGCTATCG GCTACTCCAA TGAGGATGTC GGGTTGCACT ATCTGGGGTT TGCCATGATT
CCTACCGCTT TTGGGGCGGT TGTGGGTACG CTGTTTGGAG CGTGGCTTGG CAGGGGGCTG
ATGAACATCT ATGCCGATTT CTATAATTTT GCGGAGCTGG TCTATTACTT CCGTTTCGAG
GATGTTGCCC TCTCGGTTCT TTTGAGTTTT GCTGCAGCCA TTTTTGGCGC GCTTGGTGCG
GTGCGCAAGG CGGTGCAGCT TCCTCCGGCT GAGGCGATGC GCCCGGACTC CCCGGTGCTC
TACAAGCCGG GTATATTTGA TCGAGAGTCG TTGCGAAAAA AAATTCCGGT ATCACTGCGG
ATTATTGTGC GTAACCTGGA GCGCCGCCCC TGGAAAGCCG TGCTTTCTGT GCTGATGACC
TCCCTTTCTG TCGCGATTCT CATTGCCGGT CGCTATACCT ATGACTCTCT TGACCGGATG
ATTCAGGTGG AGTTTACCCG CAAACATCGC GAGGATGTTA CCGTGATTTT CAATAATCCC
ATGCCTCCTT CGGTACGCTA TACCATTGCG TCGCTTGACG GTGTGCTTGA ACATGAATAT
TATCGTGAAG AGCCGGTGAA GATGCGTTTC GGTCATCGTA TCCGTCGGCA GTCGATCAAG
GGAATGGAGT CTGCCGAGGG GTTGCAGCGG CTGGTTGACA AGGCAAACCG ACAGTGCAGC
TTGCCTCCTG ACGGCATTGT GCTGACCTCA ACGCTTGCGA CGCTTCTTGG TGTTGGGCCG
GGCGACAAGC TGCAGATCGA GTTTCTGCAG GGCAGGCAGC GTCATGCCGA GCTTCTTGTC
AGTGGAACCA TTGATGAAAT TCTTGGCCTC TCGGCCTACA TGAACCTTGG TGCGCTGAAC
CGTCTGGCAG GCGATGGCGG GGCTCTGAAT GCGGCATATC TGCGTCTTGA TCAGGCAAAG
GCCGGGAAGC TCTACACAAC CTTCAAGGGT ATGCCGGGAG TTTCCGGCAT CATGATGCTG
AAGGCGATGA AGGAGAGTTT TGATGAGCTG ATTGCCCAGA GTATGAACAC CTCGACCGTC
ATTCTCACCT CTTTTGCCTG TGTGCTTGCC TTTGCGGTGG TTTACAATGG CGCCCGCATC
TCGCTTTCCG AGCGGGCACG AGAACTGACA AGCCTCCGGG TGCTCGGTAT GACAAAAGGG
GAAATTTCCT TTATTTTGCT TGGTGAACAG GCTCTGCTTA CCAGTGCTGC CGTACCGCTT
GGCTTTTTGA TTGGTATCGG GCTCTCTGCA CTGCTCGCCC ATGCGCTCAG TTCAGAACTC
TATCGGCTCC CTTTGGTGTT CAGCGCCTTT AACTTTCTCT TTGCCTTTAT GGTTATTGTT
CTTGTCTCGG TTGTCTCCGC TCTCCTGGTC AGAAAGCGGC TTACGGAGCT TGATCTTGTC
GAGGTTTTAA AAACAAGGGA ATAG
 
Protein sequence
MKQLQRKLLR ELMRLKGQML AVAAVVACGI SVFVSMSSVK HSLEVSRQRY YNSYRFADVF 
VQVKRAPEFY RETVSRIPGV ASVSTRITAD VTLDVPGLDE PATARLVSIP DYRTPMLNDL
FLKKGRYIEP GKPDEVIASK PFLEANHLVP GDRISAVING RKRSLLIVGM GLSPEYIYEV
QPGSFFPDKR RFGIFWMGRR SLESALDMSG AFNDLSLTLA HGASEKDVIM RLDTLFKRYG
SLGAYGRSEQ LSDRFIVDEI KQVGIQITFL PVVFLAVAVF LLNIVLRRIV ATQRDQIAVL
KAIGYSNEDV GLHYLGFAMI PTAFGAVVGT LFGAWLGRGL MNIYADFYNF AELVYYFRFE
DVALSVLLSF AAAIFGALGA VRKAVQLPPA EAMRPDSPVL YKPGIFDRES LRKKIPVSLR
IIVRNLERRP WKAVLSVLMT SLSVAILIAG RYTYDSLDRM IQVEFTRKHR EDVTVIFNNP
MPPSVRYTIA SLDGVLEHEY YREEPVKMRF GHRIRRQSIK GMESAEGLQR LVDKANRQCS
LPPDGIVLTS TLATLLGVGP GDKLQIEFLQ GRQRHAELLV SGTIDEILGL SAYMNLGALN
RLAGDGGALN AAYLRLDQAK AGKLYTTFKG MPGVSGIMML KAMKESFDEL IAQSMNTSTV
ILTSFACVLA FAVVYNGARI SLSERARELT SLRVLGMTKG EISFILLGEQ ALLTSAAVPL
GFLIGIGLSA LLAHALSSEL YRLPLVFSAF NFLFAFMVIV LVSVVSALLV RKRLTELDLV
EVLKTRE