Gene Ppha_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1273 
Symbol 
ID6463721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1333633 
End bp1334826 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content55% 
IMG OID642727514 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_002018155 
Protein GI194336361 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACAA TAACCTCTCC CCTTGATTTC ACCCTGCTGC CGCTCCCGTC AATTTATTTC 
GGTGCCGGGC GCTTTTCCCG GCTTGCGGAA CTTGCCGGAA GCTTTGGTAA AAATATTCTG
GTAGTCACCG GAAGTCGAGC TTTGCAGCGG TCAGGCCGTT TAACCTCTCT TTTTGATGGA
TTGCACCGTG ACGGTTTACA CTCCTTTCAT CTTGTCGTTG ACCGGGAACC CTCTCCGGAA
CTTGTTGACG GCGCTGTTTC ATATTACCGT GAATTTTCTG TTGATGCTGT TCTGGCGGTC
GGTGGGGGCA GTGTGCTTGA TGCAGGCAAG GCCATTTCGG CCATGTTGCG TTATGATCTT
CCGGTTGAGC GTTTTATCGA GGGGCAGGAG GGTTTCATGC AGCATGACGG GCGTAAGGTG
CCCTTCATTG CTGTGCCGAC AACATCGGGT ACCGGAAGCG AGGTGACGAA CAATGCGGTC
ATCAGCCGGG TTGGCCGGAA CGGCTTCAAG CGTTCTCTCC GCCATGCAGC ATTTGTGCCC
GATATCGCCC TTGTTGATCC TGAACTCATG GTGACCGTTT CACCGGAATT AACGGCGGCA
TCAGGGATGG ACGCCTGTAC CCAGCTTCTT GAAGCCTATA CGTCGCCCTT TGCTACGCCT
TATACCGATG CCCTTGCCTG CAGCGGCCTT GAACATTTCA GTCGCTCCTT TCTTTCCGCC
TGCACTGTCT GCTCAGGCGA CAGCGCTGTG CGGGGTGACG TTGCCTATGC CGCACTGATG
TCGGGTATTG CGCTTGCCAA TGCCGGTCTC GGGATTGTGC ACGGCTTTGC TTCGTCTGTG
GGTGGCCTGA TCGACATACC GCACGGCACA CTCTGCGCCA CCCTGCTTGC TGAAGCGACA
AGGGAGAATG TCGCTCAACT CCGCGCAATT GATGGGAGTC ACCCGGCTTT GCAGAAATAT
GCCAAAGCTG GCGTCATACT CTCGGGAGTT GCCGCAAAGG ATGTTCCTGC AGGCTGCGAA
CGTCTGGTCG AAACGCTTGA AGAGTGGCAG GAGAGCCTCT CTTTTCCCCG GTTGCGCAGT
TATGGGCTCA ATCTGGAAGA TCTTGATGGT ATTGTCACTG CTACCCGCAG CAAAAGCAAT
GCCGTTGTGC TTGACCATGC CGCCATGAAA CGGATTCTCT CAAAGCGGTT GTGA
 
Protein sequence
MITITSPLDF TLLPLPSIYF GAGRFSRLAE LAGSFGKNIL VVTGSRALQR SGRLTSLFDG 
LHRDGLHSFH LVVDREPSPE LVDGAVSYYR EFSVDAVLAV GGGSVLDAGK AISAMLRYDL
PVERFIEGQE GFMQHDGRKV PFIAVPTTSG TGSEVTNNAV ISRVGRNGFK RSLRHAAFVP
DIALVDPELM VTVSPELTAA SGMDACTQLL EAYTSPFATP YTDALACSGL EHFSRSFLSA
CTVCSGDSAV RGDVAYAALM SGIALANAGL GIVHGFASSV GGLIDIPHGT LCATLLAEAT
RENVAQLRAI DGSHPALQKY AKAGVILSGV AAKDVPAGCE RLVETLEEWQ ESLSFPRLRS
YGLNLEDLDG IVTATRSKSN AVVLDHAAMK RILSKRL