| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1266 |
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| Symbol | cobD |
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| ID | 6463741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1328457 |
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| End bp | 1329416 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642727507 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_002018148 |
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| Protein GI | 194336354 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTTTA TGAATGAGTT TATACTCCCG TTAGCCTTTA CGCTTGATCT TCTGTTTGGC
GATCCTCGCT GGATCTCTCA TCCTGTTCAG TGGATAGGCT GGTTTGCCCA TATTACCGAG
GAGCGGTTGC GTCTTACCCG TCTGCCGCTT CGTCTGGCCG GGATTCTCGC CGTTATCATT
GTTGTGGGCG CTTCTGCCGG ATCAGCCTGG CTTCTTATTG CCATGGCCAG CCAACTGCAT
CGTGTGGCAG GGTTAGCCGT TGGGATCTAC CTGCTTTTCA GCTCGTTTGC AGTCAGGTCT
CTTGGTGACC ATGCCGGGGC GGTACAGGCC GCGCTTGAAG CGGGTGACAA AGAACTGGCC
CGCCAGAAGG TTGCCTTAAT GGTTGGTCGA GATACGGCCT CTCTGGATGA AGGTGGCATA
GCGCTTGCTG CAACAGAGAG TGTCGCTGAA AACTCCGTTG ACGGAGTCAC CGCCCCCTTG
TTCTATGCGC TGCTTTTTGG CCCGGTCGGA GCAATAGCCT ATAAAGCGAT CAATACCCTT
GATTCCACCT TCGGGTATAA AAATGAGCGT TATCTGGAGT TCGGATGGGC ATCAGCAAAG
CTGGATGATC TGGCCAACTA TTTTCCTGCA CGATTGACTG TCATCCTGAT AGCTGTTGCG
GCGGTGATCG GCAAACTCAG GTTTTTTGAT ATCTTCAAAT CGGTCTGGAA GGGAGCGCGG
CTGCACGCCA GTCCCAATGC CGGTTACCCG GAATCAGCAT TTGCCGGAGC CCTTGGCGTC
ACCTTTGGCG GCCAGCGCAG TTATGGCGGT GTTGTGGAGC ACGCCCCCCT GCTTGGCGTC
AAGCCGGGGA AGTGCACCGC ACTTGTCATC CGCCAGAGTA TTGCGCTGAT GTGGATGACC
GCTGTGCTCT TTCTTGGCGC AGGCATGGGT ATCAGGATTT TGATACAATC AGCGGGTTGA
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| Protein sequence | MNFMNEFILP LAFTLDLLFG DPRWISHPVQ WIGWFAHITE ERLRLTRLPL RLAGILAVII
VVGASAGSAW LLIAMASQLH RVAGLAVGIY LLFSSFAVRS LGDHAGAVQA ALEAGDKELA
RQKVALMVGR DTASLDEGGI ALAATESVAE NSVDGVTAPL FYALLFGPVG AIAYKAINTL
DSTFGYKNER YLEFGWASAK LDDLANYFPA RLTVILIAVA AVIGKLRFFD IFKSVWKGAR
LHASPNAGYP ESAFAGALGV TFGGQRSYGG VVEHAPLLGV KPGKCTALVI RQSIALMWMT
AVLFLGAGMG IRILIQSAG
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