Gene Ppha_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1263 
Symbol 
ID6463746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp1325206 
End bp1325865 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content55% 
IMG OID642727504 
Productcob(II)yrinic acid a,c-diamide reductase 
Protein accessionYP_002018145 
Protein GI194336351 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID[TIGR02476] cob(II)yrinic acid a,c-diamide reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACC TGACAACAAA CATGACCATT ACCGAGGCGG AAAGAGAGGC TCTCTACAAG 
GTGATTTACA GCCGACGCGA TGTCCGTGGA CAGTTCCTGC CCGACATGGT GCCGGATGAG 
GTGATAGCAC GCCTCCTTGA TGCAGCGCAT CATGCCCCAA GTGTCGGCTT TATGCAGCCG 
TGGGATTTTA TTGTGGTGAA AGATGTTGAG ACACGCCGAA AAGTGAAGGA GGGGTTTGAG 
ATTGCCCATG CGGAGGCGGC CGGAATGTTC GGCGGTGAAA GGCAGGATGC TTACCGTACC 
TTCAAGCTTG AAGGGATCAT GGAGTCGGCG CTCGGAATCT GCGTCACCTG TGATCGTTCG 
CGCAGCGGGG AGGTGGTGAT TGGGCGGACA GCGAACCCGG AGATGGATCT CTACAGTTCG 
GTCTGTGCGG TGCAGAACCT CTGGCTTGCG GCAAGGGCTG AAAATCTCGG TGTTGGCTGG 
GTCAGCATTG TCCATCACGA TCATATCCGT GAGGCGCTTG GTATTCCTGA CCATATTGTG 
CCGGTGGCCT ATCTCACCGT GGGCTATGTC AGCTTTTTTC ATGCAACGCC GGAACTTGAG 
CAGGCGGGCT GGCTACCGAG AATGGAGCTT GAAACTCTTG TCCATCACGA AACATGGTAA
 
Protein sequence
MSNLTTNMTI TEAEREALYK VIYSRRDVRG QFLPDMVPDE VIARLLDAAH HAPSVGFMQP 
WDFIVVKDVE TRRKVKEGFE IAHAEAAGMF GGERQDAYRT FKLEGIMESA LGICVTCDRS 
RSGEVVIGRT ANPEMDLYSS VCAVQNLWLA ARAENLGVGW VSIVHHDHIR EALGIPDHIV 
PVAYLTVGYV SFFHATPELE QAGWLPRMEL ETLVHHETW