| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1253 |
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| Symbol | |
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| ID | 6463764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1312949 |
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| End bp | 1315831 |
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| Gene Length | 2883 bp |
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| Protein Length | 960 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642727496 |
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| Product | WD-40 repeat protein |
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| Protein accession | YP_002018137 |
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| Protein GI | 194336343 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATT TAATGCGCAA CCTGTTACCC AAAATCGCAA TGGGCGTTGG AGGCTCAACG
TGGGACAGTA TTGCTTCTCG CCTGTTTGGT TATGACATAT TTGTCTCGTT TGCATTGGGG
CGACCACCAA GGGGGACAAG AAATTATGCT TCGGATCTTA CACGTCGCTT GAAGGATCAT
GATTTTCGGG TGTTTTTCAG CGAGGAAGAA GCTGCTCCAG GAGAAGCCTT GGATGCAGCT
CTTCAAAAAG CATTGTTTCG TTCAAGGGCA CTGGTTGTCG TGGCAAACAA GGAGACGCTG
AATGACCCGA GGTGGGTACA GGTGGAGGTT GAGAAATTCA GGGAACGACA TCCAAAACGT
CCTGTCATCA CCATTAACGT CGAAGGGGCA ATCCATGACC CTTCGATCAA GGACAGGACG
AACAAATGGC TTGGCCACCT CGGCAAGATA TGGCTGGATG AAACAGAGGG TGCCGTCAGG
GAAGGAAAAG CCAGTGACGA TCTTGTTGAA CGGCTGGCGA TAACGCCGAG GCATGCCAGG
GTCAATACGC TTTGGAAAAC GCTTGTATTC GGGGTAGTCT TTTTGCTTTT AACTTTGACG
ATCCTGTCGT TTAAAAGTGC AAACCGCGCA AGGTCAGAGC TGAAAAAAGA AGTATCTCTG
AGGCTCGTGA GCGATGCTGA CAAAATGATT ACTGGCCAAC AGGAAGGGGA CAATCTGAAG
GTGTTACAGA ACTTGATAGC GGCCTACCGG ATTATGCCTG GGACGGTAAC GGAGGGTGGT
TTGATGAGCG CCTTGCTGCA TTATCGCGAT CTGAAGAAAA TCGTGACGGA TAAGGAGCCC
ATCATCGCAA TGACCTACAG CCCGGACGGG AGTCAGATTG TTGTTGGCCG TGAGGATTGT
GCCGTAGAGT TCTGGGATGC TAAAACAGGC AATTTTATCA GGAGAACCGT TTTTGAAAAC
AACGAGGACG CGCTGATTAA CAAAATGTTC ATCAACGTCG CTAAGGGGCG TGCCGTTGCC
ACAGTTCCTG TTGGTGGTGG TGAGTTGACC GTTCGCGTCT ATGATATTAA TACGGGTGTT
TTGACGGTAA AATGTATCAC ATTAAAAAAA GATGAGCTGA CCGATGTCAA GATGAGCCCG
GACGGCATGG TTGTCATCAC CGTCACCAAT GAAAGGCAGG CTAACAAGCT ATACCCAGAA
AAGGTGATGC GTTTATGGGA TGCCAGCACT GGCCAGATGA TCGGTTTGCC TATTATCAAT
CATGGGTGTG AACGGGTCGA ATTCAGTCCG GATGGGCGAT TTGTGGCGAG CGGCAACAGT
TATTATAAAA GAATTCTCTT AAGTGAAATT TACCAGAAAA CTGTTCGTCT CATCGACTTG
AAGACTGGCA ATATGGTGTG GGAGTCGATC AGGGGCTCCT CCGATGTTGG ATATGTCAGC
GCCATGGCCT TCAGCAGGGA TGGTAGTCGG TTTGTCGTTG GCGATTCAAA GGGTTTTTTG
CAGGTTTTGG ATGCCAGTAC GGGTGGCCAG ATAAATAAAA TCAAGGGGCA TGAGGCGTAT
ATCAACAGTC TGGCGTTTAG TCTCGATGGC AGATACATTG CTTCAACCAG CCAAGATCGA
ACGGTCAAGA TATGGAATGC CGTTATGGGA GTGGAATGCA GTGCGTTAAT GAAAAACAGC
ACCTTTTCAG GATCATCAAT AGTGACGTAT TCGCCAGACG GACGTGAGTT AACATATGCT
TCGTTTGGGG GGACGGTGGA GATATGGAGA ACTTCTGGAT GGGAATCTTC TCAGAATAAC
ATTGGGAAGG TTATCTGGCC CGAGACAAGC ATCACATGCA CCAGCAAGGA CGGACGTTTG
GTCGCGTTGG GGTATGGTGA TGGATCGATT TTGGTCTTTG ATGCAGCGAG CGGGAAACTC
GCTGGACCGT TAATAAAAGG ATATATCGGA TTGCCATCAA TCGATCGTTT TGGAGGAATA
GAAGCCATGT GCTTTGACCC CGATGGCAAT TCGATCATCG CTTGCCATTT CCACGGCGAA
ATGCAACGAT GGGATGTAAA GACGGGGAAA AATATTGGCA GCACCATGAT CGCAGGGGAA
AATTTTTTAT TTCATCCCGT TGCCGTAGCA GTCAGCAATG ATGGCAAAAA AATCATAACA
GGTGCGGAAT ACGGTCAATT GCAAATGTGG GATGCTCAAT CGCAACAACC GATTGGCGGT
GAAATGAAGG GCAGCATTGC TATGATGCTG AAAACCATTA AATACAGTGT GGACGGTCAG
CGTATCATTT TGGGGGGGGA CTTTGGAGAA CTGGAATTGC TGGACGCGGA TTCCGGGAAG
CATCTTGCTG GTGAACGGAA TTTCAAAAAG TCACTATATT CCGGATTTTT GGCATGTCTT
GCAGAAAGCG TAGATGGAAA ATATCTGGTT ACCGGTACTG AAAATGGGTC TCTTTCTCTC
TGGGATTCGA GAACTTTAAA TTTGGTTAAA AAAGTATATA ACGCCCATTT GGGGAAGATT
ACCAGTATAG GGTTCAGTCC TGACGGCAAA TATATCATAT CCGCTGGCGA AGACCGGACG
GAACGTTTTT GGGAAGCAGG CTCAATGAAA ATGATCGGAG AGCCCTTGCG TCTGCATGAA
TACAAGGTGG AGCGTGTGAC CTTTTGCGAT GAAGGTCGGC GAATTTTCTC GGTTGATGCA
AATAAAATCG TTAAAAGCTG GCCAGCCCCT GTTGGATGGG TAGACGAGCT TTCTTCAAGA
ATAAACAGGA ATATGACTGA TAAAGAGTGG AAGGAGAGGG TTTCTTCTGA GTTAGACTAT
TTCAAACAAA GTCGTCAGCT TCCGATTGCC AAAGAGAAAA GGGCATTTGT ATATGACTAT
TAA
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| Protein sequence | MFDLMRNLLP KIAMGVGGST WDSIASRLFG YDIFVSFALG RPPRGTRNYA SDLTRRLKDH
DFRVFFSEEE AAPGEALDAA LQKALFRSRA LVVVANKETL NDPRWVQVEV EKFRERHPKR
PVITINVEGA IHDPSIKDRT NKWLGHLGKI WLDETEGAVR EGKASDDLVE RLAITPRHAR
VNTLWKTLVF GVVFLLLTLT ILSFKSANRA RSELKKEVSL RLVSDADKMI TGQQEGDNLK
VLQNLIAAYR IMPGTVTEGG LMSALLHYRD LKKIVTDKEP IIAMTYSPDG SQIVVGREDC
AVEFWDAKTG NFIRRTVFEN NEDALINKMF INVAKGRAVA TVPVGGGELT VRVYDINTGV
LTVKCITLKK DELTDVKMSP DGMVVITVTN ERQANKLYPE KVMRLWDAST GQMIGLPIIN
HGCERVEFSP DGRFVASGNS YYKRILLSEI YQKTVRLIDL KTGNMVWESI RGSSDVGYVS
AMAFSRDGSR FVVGDSKGFL QVLDASTGGQ INKIKGHEAY INSLAFSLDG RYIASTSQDR
TVKIWNAVMG VECSALMKNS TFSGSSIVTY SPDGRELTYA SFGGTVEIWR TSGWESSQNN
IGKVIWPETS ITCTSKDGRL VALGYGDGSI LVFDAASGKL AGPLIKGYIG LPSIDRFGGI
EAMCFDPDGN SIIACHFHGE MQRWDVKTGK NIGSTMIAGE NFLFHPVAVA VSNDGKKIIT
GAEYGQLQMW DAQSQQPIGG EMKGSIAMML KTIKYSVDGQ RIILGGDFGE LELLDADSGK
HLAGERNFKK SLYSGFLACL AESVDGKYLV TGTENGSLSL WDSRTLNLVK KVYNAHLGKI
TSIGFSPDGK YIISAGEDRT ERFWEAGSMK MIGEPLRLHE YKVERVTFCD EGRRIFSVDA
NKIVKSWPAP VGWVDELSSR INRNMTDKEW KERVSSELDY FKQSRQLPIA KEKRAFVYDY
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