Gene Ppha_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1244 
Symbol 
ID6463782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp1303762 
End bp1304847 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content47% 
IMG OID642727491 
Producttransposase IS204/IS1001/IS1096/IS1165 family protein 
Protein accessionYP_002018132 
Protein GI194336338 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.661907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAC TAACCGAGCA TTACCAGCAA TTACTGGGAT TTCCTGCCAT CTGGGAGGTC 
GATGATGTCA ACCTTTCCGT TTCTGGTCTG AAGATAGAAG TTCACCTCCG TTTTGTAGGC 
GATGAAGTAA TATGCCCTCA ATGTGGGGTG CGCGGGAAAG CCTATGACAA GGCCCCTGAA 
CAACGTTGGC GGCATCTTGA TACCATGCAG TTTGAAACCA TCATCATAGC ACGCATTCCC 
CGTTGTCAGT GCGAAACGTG TGGTGTGAAG ACCATAGCAG TCCCTTGGGC GGCCCCCCAT 
TCCCGTTTTA CCCTCATGTT TGAAGGTTTT GCCGTTGCTC TGCTCCAGCA CTGTTCCAGT 
GTACAAGCGG CCTCAAATAT ACTCAAGCTT GATTGGCATG CTGTGGATCA GATTATGAAA 
CGTGCTGTAG AGCGAGGACT TCTACGCCGT GAGCCCGATG ATGTAGTGCA TGTAGGTATG 
GACGAAAAAA GCTTCAGGTC GGGCCAGAAA TACATCACCA TACTCAATGA TCTTGATAAA 
AGCCGAGTAC TTGATGTCAT TGAGGATCGG ACACTGACAG CAACGAAAAA GCTGTTAGGA 
ACCCTTTCAA AACAACAACG AAAGGCAGTT AAGTCGGTAT CGCTGGATAT GTGGCAAGCC 
TTTGCAACAG CTACACATAA GCTCCTTCCT GCGGCTGATA TTGTTCACGA CCGGTTTCAC 
ATCAGCAAAT ATCTTAATGA CGCAGTTAAC AAGGTTCGGC ATCAGGAATC ACAGGAACTG 
AAGAAAGATG GGGATACAAG GTTGGTTGGC TCGAAATACA CCTGGCTTCG AAATCCCGAA 
AAGATGACCA AGAGCCAAAA AACACGGTTT AACGAGTTGA TAGCATGCGA ATTTAAGACC 
GGTGTGGCTT GGGTGTTGAA GAATATCTTT CGTGATTTCT GGAACTGCTC ATCAGGACTG 
AGGGGCGAGA TATTTTTCGC GTACTGGTGT GAGTTAGTCG ACAAGACAAA ACTGAAGCCA 
CTGATAAAAG TGAAAGATAT GATGGAACGT CATAAAGGGA ACATTCTCAA TTACTGTGCG 
CTGTAG
 
Protein sequence
MQKLTEHYQQ LLGFPAIWEV DDVNLSVSGL KIEVHLRFVG DEVICPQCGV RGKAYDKAPE 
QRWRHLDTMQ FETIIIARIP RCQCETCGVK TIAVPWAAPH SRFTLMFEGF AVALLQHCSS 
VQAASNILKL DWHAVDQIMK RAVERGLLRR EPDDVVHVGM DEKSFRSGQK YITILNDLDK 
SRVLDVIEDR TLTATKKLLG TLSKQQRKAV KSVSLDMWQA FATATHKLLP AADIVHDRFH 
ISKYLNDAVN KVRHQESQEL KKDGDTRLVG SKYTWLRNPE KMTKSQKTRF NELIACEFKT 
GVAWVLKNIF RDFWNCSSGL RGEIFFAYWC ELVDKTKLKP LIKVKDMMER HKGNILNYCA 
L