| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1228 |
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| Symbol | |
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| ID | 6462048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1285429 |
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| End bp | 1286322 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642727476 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002018117 |
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| Protein GI | 194336323 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATC GTTTACGTTT TTTTTATATC GCTATAATCG CGTTTCTGTT TACAGGTAAT
GTTGCTTATG CACATAACGA AGAGGCTCAA CGTCTTTTGT CGAGTGGCGA AGCATACTGC
AAGTCAGGCA AGAATACGGA AGCTATAGCA GAACTGACAA AGGCCATTGA GCTTGAACCA
AAACTTTCAC CAGCAGACCT TTCAACAGCG TACTACAACC GGGCAGTTGC AAGGCGTACC
ATTGGAGACA GCCTGGGCTC CAAAGCTGAT TTCGAGAAGG TTGTTGATCT TGATCCAACT
CCGAGAGATG CTGCAGCTTA CCATAATCGC GGGATTGCCA AATCGACTCT GGGAGACAAA
GAGGGGGCTC TGGTTGACAT GAAAAAAGCA GCACTCCTTG GTAATATCCC TGCCCGTGAG
TGGCTGAAAA ATAATGGAGA GAAAAATCCA CTCTATACAG CCCTTGACGA TGCACAAAAC
CTGTTGTCAA GCGGCAAGGC AAAGCTTGCA TCAGGAGATC ACAAGGGAGC GATTGTCGAC
TTCACCAAGG CAATCGAACT TGATCCGAAA CTTGCTGCGG CATACTTTAA TCGTGGGATT
GCAAAAAGTT TGACGGGAGA GAACAAGAGT TCAAGAGAGG ACTTTGCAAA GAGCATCAAG
CTTGATCGTA CTCCGAAAGA TGCAGAAGCT TACTGTAATC GCGGGATTGC CAAATCCGCC
ATCAACGACA AGAAAGGGGC TTTGACTGAC TTTAATAAAG CCATTGATCT TGATCCGAAG
TATCGTGAAG CTTATTCCCG TCGCGGAAAA CTGAAAAACG AGATGGGAGA CAAAGCGGGT
TCTCTGGCTG ACGTTAAAAC AGCAACAGAA CTGAGCGCTA TAGCACACCC TTGA
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| Protein sequence | MQNRLRFFYI AIIAFLFTGN VAYAHNEEAQ RLLSSGEAYC KSGKNTEAIA ELTKAIELEP
KLSPADLSTA YYNRAVARRT IGDSLGSKAD FEKVVDLDPT PRDAAAYHNR GIAKSTLGDK
EGALVDMKKA ALLGNIPARE WLKNNGEKNP LYTALDDAQN LLSSGKAKLA SGDHKGAIVD
FTKAIELDPK LAAAYFNRGI AKSLTGENKS SREDFAKSIK LDRTPKDAEA YCNRGIAKSA
INDKKGALTD FNKAIDLDPK YREAYSRRGK LKNEMGDKAG SLADVKTATE LSAIAHP
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